Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00654 ATGATCCAATCACTATCCGACATGTGTTGCCTTCCTCATCGAAATCCACCGCCGCTCCGAGCCATGTTCTTGCCTCGATTACTCGCCGTCGTTTTTCTCTCCTCCCTCTGCTTCCTAACCCTCACTGCCGGAGCCGCTCGCCTGCCGGACGACGAAGTCGAAGCGTTGAAGGAGATCGGAAGGACATTGGGAAAGACCGACTGGAATTTCGCCGCCGATCTATGCGGCGGCGTCGGCTCCGGTTGGATAACGAATTCGACGCAGTTCGATCCAAGTTTTGTTAACAATGTTACCTGCAATTGCTCGTTCCAAAATAATACTGTTTGTCACGTCACTAACATTGCTCTGAAGGCGCAGAGTCTTCCAGGTACTCTGCCGCCGCAAATAGTGAGGTTGCCTTTCCTGCAGGAACTTGATCTCACCCGCAATTATCTCAGCGGCCGAATTCCTCCAGAATGGGGTTCATCCAAGCTTCTCAAAATTTCCCTTCTTGGAAATCGATTGACGGGTCCTATCCCAAAAGAGATTGGAAACATCAGTACTCTTGCGGAGTTGGTTCTGGAAATGAATCATTTCTCTGGAAGTATACCTCCAGAAATTGGGAATTTGACCAGCTTATCAAGATTACTTCTTACCTCAAACAACTTTTCTGGGGAGCTCCCACCTTCCCTAGCAAGGATAACCACATTGACGGACTTTCGAATTAGTGATAATCACTTCACAGGGCCAATTCCTAAGTTTATTCAGAATTGGAAGAATCTTGGAAAAGTAGCTATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCTTCTGAAATTGGACTTTTGACAAATTTAACTGATGTGAGAATCAGCGACTTGAATGGCGGTTCATCGCTCTTTCCACCCCTTGATACTTTGACAAAATTGAAAACCCTGATATTGAGGAGTTGCAATATAACTGGGGTGCTGCCCGACAATCTTGGTGGACTTACAGCATTGAAAACTCTAGACTTTAGCTTCAACAAAATTACTGGACCAATACCTGCCAGCTTTGAAGCGTTGAAAAAAGTGGATAGCATATATCTATCTGGAAACTTGCTAAATGGATCAGTGCCCTCTTGGATGCTACAACAAGGAGAAAGCATCGATCTCTCTTATAACAAATTTACTCGGATAAATGATCAGAACACTGGTTGTCAATCACGAAATTTAAACCTGTTTGCGAGTTCTTCACAGGACAATAATTTGAATGGAGCAGTTTCCTGTTTACCGAGCGCTTGTGGAAAAACTTCATACACTCTCCATATCAACTGCGGTGGGAAGGAAGAAACAATTAACGGAACACCCAAATTTGATGCGGACACAAACACTGGAAAGTCGTCATTGTTTTCTCAAGGTGGAGAAAATTGGGGATTTAGCAACACTGGTAATTTTATGGACGATGATCGCACAACAGATGATTTTATCGCATTAAACTCATCTGCTCTCTCAATATCAAATCCTGAATTGTACATGAGGGCACGCATTTCTCCGATCTCTCTTACTTATTATGCATATTGCATGGGTAATGGAAACTACACAGTAAGCCTCCATTTTGCTGAGATAATGTTTACTGATGACAAATCATACAGAAGCCTTGGCAGACGCTTATTTGATGTCTACGTTCAGGGAAAGCTGGAGTTGAAGGATTTTAACATTGCAGATGCAGCAGGTGGTATTGGCAAACCTTTTGTAAAGAAATTCACAGTTTCTGTGACTAATGGTACTGTAGAGATCCGCCTATTTTGGGCTGGGAAGGGGTCAAATGCTATTCCTGTGCGAGGAGTTTACGGTCCTTTAATTTCCGCCATTGCTGTTGATCCTGACTTTGATCCACCATCAGAGGATGGACATGCCATATCTGCTGGTACAGTGGGTGGAATTGTGGCTGCTGGGGTCTCTGTTATCATCTTGGTTCTTGGAGTGTTGTGGTGGATAGGATGTCAAAGAAAGACGGGCACACTTGAACAAGAGTTGAAGGGTCTAGATCTCGGAACAGGTTCGTTTTCATTAAGACAAATCAGAGCTGCCACTAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGAGGTTTTGGTCCTGTTTACAAGGGCGTTCTTGCCGATGGCACCGTAATTGCAGTGAAGCAACTCTCTGCAAAATCAAAGCAAGGAAATCGTGAATTTGTTAATGAGATAGGGATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAAATCAACTTTTGCTTATATATGAGTATCTGGAAAACAATAGCCTTGCTCGTGCCTTATTCGGACCCCAAGAATGTCAGCTGAAACTGGATTGGCCAACTAGGCAGAAGATTTGTGTTGGTATAGCCAGAGGTTTAGCATACCTTCACGAGGAGTCGAGACTTAAGATTGTTCACCGAGATATCAAAGCTACCAACGTTCTGCTCGATAAAAACCTCAACCCCAAGATTTCCGACTTCGGTTTGGCCAAGCTGGATGAAGAAGAAAATACACACATCAGCACCCGGGTTGCGGGAACCTTCGGGTATATGGCACCAGAATACGCCATGCGAGGCTACTTAACCGACAAGGCAGATGTTTACAGCTTTGGCATTGTGGCGTTGGAGATAGTCAGTGGTCGAAGTAACACAAGTTTCCGAACCAAGGATGATTGCTTTTACCTTCTTGACCATGCCAATACTCTAAAAGAGAAAGACAGTTTATTAGAGCTTGTGGATCCACGGTTAGGTTCTGATTTCAACAAGAGAGAGGCAATAGCGATGATCAATATTGCTCTCCAATGCACAAACGTCATTGCTGGGGACAGACCTGCCATGTCCTCTGTGGTGAGCATGCTGGAAGGGAAGGTTGCCGTGAAGGAGTTGGTTTCAAATCCTAGTGTCTCTAAACAAGATGTGAATGCAATGTGGAGCCAAATTTATCGCCAGAAAGGGCAAACGACAGACGAGAGCCAGACGCAAAGTTCGACGATGGATGGACCATGGACTGGTTCTTCAACAAGTGCCAGTGATCTCTACCCCATCCTCATGGATTCTAAATACTTGGAGAATAGAAGCCAAGGTTGA 3102 44.52 MIQSLSDMCCLPHRNPPPLRAMFLPRLLAVVFLSSLCFLTLTAGAARLPDDEVEALKEIGRTLGKTDWNFAADLCGGVGSGWITNSTQFDPSFVNNVTCNCSFQNNTVCHVTNIALKAQSLPGTLPPQIVRLPFLQELDLTRNYLSGRIPPEWGSSKLLKISLLGNRLTGPIPKEIGNISTLAELVLEMNHFSGSIPPEIGNLTSLSRLLLTSNNFSGELPPSLARITTLTDFRISDNHFTGPIPKFIQNWKNLGKVAIQASGLSGPIPSEIGLLTNLTDVRISDLNGGSSLFPPLDTLTKLKTLILRSCNITGVLPDNLGGLTALKTLDFSFNKITGPIPASFEALKKVDSIYLSGNLLNGSVPSWMLQQGESIDLSYNKFTRINDQNTGCQSRNLNLFASSSQDNNLNGAVSCLPSACGKTSYTLHINCGGKEETINGTPKFDADTNTGKSSLFSQGGENWGFSNTGNFMDDDRTTDDFIALNSSALSISNPELYMRARISPISLTYYAYCMGNGNYTVSLHFAEIMFTDDKSYRSLGRRLFDVYVQGKLELKDFNIADAAGGIGKPFVKKFTVSVTNGTVEIRLFWAGKGSNAIPVRGVYGPLISAIAVDPDFDPPSEDGHAISAGTVGGIVAAGVSVIILVLGVLWWIGCQRKTGTLEQELKGLDLGTGSFSLRQIRAATNNFDAANKIGEGGFGPVYKGVLADGTVIAVKQLSAKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPQECQLKLDWPTRQKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEENTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTSFRTKDDCFYLLDHANTLKEKDSLLELVDPRLGSDFNKREAIAMINIALQCTNVIAGDRPAMSSVVSMLEGKVAVKELVSNPSVSKQDVNAMWSQIYRQKGQTTDESQTQSSTMDGPWTGSSTSASDLYPILMDSKYLENRSQG 1033
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3265759 3276325 + CmoCh09G006540.1 Cmo09g00654 388656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00654 1033 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 405 1000 - -
Cmo09g00654 1033 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 313 367 - -
Cmo09g00654 1033 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 99 312 - -
Cmo09g00654 1033 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 405 1000 - -
Cmo09g00654 1033 Gene3D Ribonuclease Inhibitor 50 213 IPR032675 -
Cmo09g00654 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Cmo09g00654 1033 CDD STKc_IRAK 693 960 - -
Cmo09g00654 1033 SUPERFAMILY L domain-like 101 383 - -
Cmo09g00654 1033 Pfam Protein tyrosine and serine/threonine kinase 690 957 IPR001245 GO:0004672|GO:0006468
Cmo09g00654 1033 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 313 367 - -
Cmo09g00654 1033 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 99 312 - -
Cmo09g00654 1033 MobiDBLite consensus disorder prediction 989 1015 - -
Cmo09g00654 1033 Pfam Malectin domain 426 610 IPR021720 -
Cmo09g00654 1033 Pfam Leucine rich repeat 301 360 IPR001611 GO:0005515
Cmo09g00654 1033 ProSiteProfiles Protein kinase domain profile. 687 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00654 1033 Gene3D Ribonuclease Inhibitor 214 283 IPR032675 -
Cmo09g00654 1033 SUPERFAMILY Protein kinase-like (PK-like) 671 982 IPR011009 -
Cmo09g00654 1033 SMART serkin_6 687 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00654 1033 Gene3D Transferase(Phosphotransferase) domain 1 763 973 - -
Cmo09g00654 1033 Gene3D Ribonuclease Inhibitor 284 400 IPR032675 -
Cmo09g00654 1033 Gene3D - 422 614 - -
Cmo09g00654 1033 Gene3D Phosphorylase Kinase; domain 1 654 762 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01318 Cmo-Chr1:10470993 Cmo09g00654 Cmo-Chr9:3265759 0 dispersed
Cmo01g01319 Cmo-Chr1:10480953 Cmo09g00654 Cmo-Chr9:3265759 0 dispersed
Cmo01g01321 Cmo-Chr1:10500011 Cmo09g00654 Cmo-Chr9:3265759 0 dispersed
Cmo09g00654 Cmo-Chr9:3265759 Cmo19g01087 Cmo-Chr19:9337712 0 dispersed
Cmo09g00654 Cmo-Chr9:3265759 Cmo09g00655 Cmo-Chr9:3277220 0 tandem
Cmo06g00914 Cmo-Chr6:6442327 Cmo09g00654 Cmo-Chr9:3265759 0 transposed
Cmo01g01316 Cmo-Chr1:10421966 Cmo09g00654 Cmo-Chr9:3265759 1.09E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74572 PF07714 PK_Tyr_Ser-Thr 7.90E-47 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00654 - - csv:101221782 1661.74