Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00655 ATGTTTGTGGTTCGATTCCTCGCCGTCTTTTTTCTCTTCTCTCTCGCTTCCGCCGCCGCTCGGCTGCCGGACGACGAAGTTGAGGCGCTGAGGAAAATCGGAAAGACATTGGGGAAGACGGACTGGAATTTCTCGGCGGATCCATGCGGCGGTTTGAGTAGCGGTTGGGTATCGGCTTCCTTCGAAACTGGTTATTATAATAACGTCACCTGCAATTGCACCTTCCACGCTCATACCGTCTGCCACGTCACCGGCATTCGTCTAAGGGCGCAGAGCCTTCCGGGTACTCTGCCGCCGGAAATAGCGAGGCTGCCTTTCTTGCAGGAACTCGATCTTTCCCGCAACTATCTCAGCGGCCCGATTCCTCCAGAATGGGGTTCCACCAAGCTTGCCAACATCTCTCTTCTTGGAAATCGATTGTCGGGTCCAATCCCAAAAGAGTTGGGAAACATCAGCACGCTTCTAGAGTTGGTCATTGAAGTTAATAATTTTTCTGGAAGTCTACCTCCAGAACTTGGAAATTTGACCAATTTATCAAGATTACTTCTCACCTCAAACAACTTTTCTGGGGAGCTCCCATCTACCCTGGGAAGTATAACCACTATGACGGACTTTCGAGTTAGTGATAATCACTTCACAGGGTCAATACCTAAGTATATTGAGAATTGGCCGAAACTTATAAAACTAGCTATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCTTCTGGAATTGGACGTTTGACACGACTAAATGATGTGAGAATCAGTGACTTGAACGGAGATCCATCACCCCTTCCACCCATTAATACTTTAACAAATTTGAAAACCCTGATATTGAGGAGTTGCAATATAAATGGGACGCTGCCCGAAAGTTTTGAGGGGCTGCAAAACGTGCAAACCATAGACTTAAGCTTCAACAAGATTACTGGACCAATACCTGCCGGCTTTGAAGCTTTGAAAAAAGTGGATAGAATATATTTAGCTGGAAACTTGCTAAACGGAGCGGTGCCTTCTTGGATGCTGGAGGAAGGAGAAAACATTGATCTCTCTTATAACAAATTTACTCATACAAATTTTCAGGACATTGGTTGTGAAGCACGAAGTATAAACCTGTTTGCGAGCTCGTCAGAGGATAATAATTCTGGAACAGTTTCATGTTTAGCGGGCACTTGTCCAAAAACTTGGTATTCACTCTATATCAATTGCGGTGGGAAGGAAGATTTAGTTAACAGAACAATCAAGTATGATGCCGACACAAACACTGGAAAATCATCCTTGTTTTTTCAAGGTGGAGAAAATTGGGGATTTAGCAACACTGGTAGTTTTATGGACGATGATCGCTCAACAGACGACTACATTACATTAAGTCCACCTTCTCTCCCTATGCCAAATCTTGAATTGTACAAGAGTGCACGAATTTCTCCAATCTCTCTTACTTATTATGCATATTGCATGGGTAATGGAAACTACACGGTAAGCCTCCATTTTGCTGAGATAGAGTTTTCTGATGACAAGACATACAAAAGCCTTGGCAGACGCTTATTTGATATCTACATTCAGGGAAAGCTGGAGGTGAAGGATTTTAATATTGCAGATGCAGCAGGTGGCGTTGGCAAACCTTTCGTACAGAAATTCACTGTTTCTGTAACTAATGGTTCTATAGAGATTCGCCTATTTTGGGCTGGGAAGGGGACAAATTCAGTCCCTATGAGAGGAATTTATGGTCCTCTAATTTCAGCCATTTCTGTTGATCCTGACTTTGAGCCACCATCAATGGGTGGAAATGTCATATCTGCCAGTACATTGAATGGAATTATGGCTGCTGTGGTCTTTATTATCATCTTGGTTTTTGGAGTCTCGCGGTGGAGAGGCAGCCAAATAAAGAAAAGCACACTTGAACAAGAGTTGAAAGACATAGATCTAGGAACAAGTTCATTTTCATTAAGACAAATCAAAGCTGCCACTAACAATTTTGATGCTGCCGATAAGATCGGAGAAGGCGGTTTTGGTCCTGTTTACAAGGGCGTTCTTGCCGATGGCAGTGTAATTGCAGTGAAACAACTTTCTTCGAAATCGAAACAAGGAAATCGAGAATTTTTGAATGAGATAGGCATGATATCTGCGTTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGCTGCATTGAAGGAGATCAACTCTTGCTAATATATGAGTATCTGGAAAATAATAGCCTTGCTCGTGCCTTATTCGGACCTGAAGAATATCAACTGAACTTGGATTGGCCAACTAGGCAGAAGATATGTATTGGTATTGCTAAAGGTTTAGCATATCTTCATGACGAGTCGAGACTAAAGATCGTTCACCGAGACATCAAAGCTACCAATGTTCTTCTCGATAAAAATCTAAACCCCAAGATTTCCGACTTTGGTTTGGCCAGGCTGGATGAAGAAGGAAATACACACATCAGCACACGGGTTGCCGGAACCTATGGATATATGGCACCAGAATACGCTATGCGAGGCTACTTAACTGACAAAGTAGATGTTTACAGCTTCGGTGTGGTGGCATTGGAAATAGTCGGTGGTCGAAGCAACACAAGTTTTGGATTCAAGGATGATTGCTTATACCTTCTTGACTATGCTTACATTTTAAAAGAGGGAGGCAATTTACTAGAGCTTGTTGATCCACGGTTAGGCTCCGAATTCAACGAGAGCGAGGCAATGACGATGATCAACATTGCTATCCAATGCACGAACATCAATGCTGCAGACAGACCCTCGATGTCACTAGTAGTGAGCATGCTGGAAGGGAAGGTTGCTATGGAGGAGGTGGTTTCAGATCCTACTATCTCAAAGCAAGATGTGAATGCAGTGTTGAGCAAACTGTACGGCAAGAAAGGGCAAACGACGAGCGAGAGCGAGATACAAAGCATGATGACGTGCGAGAGCGAGACACAAAGTATGTTGAAGGATGGACCATGGACTGATTCTTCAAATACTGACAGTGATTATCATAACATCATCTTGGATTCTAAATGA 3021 43.5 MFVVRFLAVFFLFSLASAAARLPDDEVEALRKIGKTLGKTDWNFSADPCGGLSSGWVSASFETGYYNNVTCNCTFHAHTVCHVTGIRLRAQSLPGTLPPEIARLPFLQELDLSRNYLSGPIPPEWGSTKLANISLLGNRLSGPIPKELGNISTLLELVIEVNNFSGSLPPELGNLTNLSRLLLTSNNFSGELPSTLGSITTMTDFRVSDNHFTGSIPKYIENWPKLIKLAIQASGLSGPIPSGIGRLTRLNDVRISDLNGDPSPLPPINTLTNLKTLILRSCNINGTLPESFEGLQNVQTIDLSFNKITGPIPAGFEALKKVDRIYLAGNLLNGAVPSWMLEEGENIDLSYNKFTHTNFQDIGCEARSINLFASSSEDNNSGTVSCLAGTCPKTWYSLYINCGGKEDLVNRTIKYDADTNTGKSSLFFQGGENWGFSNTGSFMDDDRSTDDYITLSPPSLPMPNLELYKSARISPISLTYYAYCMGNGNYTVSLHFAEIEFSDDKTYKSLGRRLFDIYIQGKLEVKDFNIADAAGGVGKPFVQKFTVSVTNGSIEIRLFWAGKGTNSVPMRGIYGPLISAISVDPDFEPPSMGGNVISASTLNGIMAAVVFIIILVFGVSRWRGSQIKKSTLEQELKDIDLGTSSFSLRQIKAATNNFDAADKIGEGGFGPVYKGVLADGSVIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLYGCCIEGDQLLLIYEYLENNSLARALFGPEEYQLNLDWPTRQKICIGIAKGLAYLHDESRLKIVHRDIKATNVLLDKNLNPKISDFGLARLDEEGNTHISTRVAGTYGYMAPEYAMRGYLTDKVDVYSFGVVALEIVGGRSNTSFGFKDDCLYLLDYAYILKEGGNLLELVDPRLGSEFNESEAMTMINIAIQCTNINAADRPSMSLVVSMLEGKVAMEEVVSDPTISKQDVNAVLSKLYGKKGQTTSESEIQSMMTCESETQSMLKDGPWTDSSNTDSDYHNIILDSK 1006
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3277220 3286677 + CmoCh09G006550.1 Cmo09g00655 388657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00655 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Cmo09g00655 1006 Gene3D Ribonuclease Inhibitor 261 384 IPR032675 -
Cmo09g00655 1006 Pfam Malectin domain 397 581 IPR021720 -
Cmo09g00655 1006 Gene3D Transferase(Phosphotransferase) domain 1 734 951 - -
Cmo09g00655 1006 SUPERFAMILY L domain-like 73 355 - -
Cmo09g00655 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 966 - -
Cmo09g00655 1006 Gene3D Phosphorylase Kinase; domain 1 620 733 - -
Cmo09g00655 1006 Gene3D - 395 585 - -
Cmo09g00655 1006 CDD STKc_IRAK 664 931 - -
Cmo09g00655 1006 MobiDBLite consensus disorder prediction 982 1006 - -
Cmo09g00655 1006 Pfam Leucine rich repeat 272 332 IPR001611 GO:0005515
Cmo09g00655 1006 SMART serkin_6 658 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00655 1006 Pfam Protein kinase domain 661 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00655 1006 ProSiteProfiles Protein kinase domain profile. 658 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00655 1006 SUPERFAMILY Protein kinase-like (PK-like) 642 943 IPR011009 -
Cmo09g00655 1006 MobiDBLite consensus disorder prediction 982 1000 - -
Cmo09g00655 1006 Gene3D Ribonuclease Inhibitor 23 260 IPR032675 -
Cmo09g00655 1006 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 71 966 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00655 Cmo-Chr9:3277220 Cmo19g01087 Cmo-Chr19:9337712 0 dispersed
Cmo09g00654 Cmo-Chr9:3265759 Cmo09g00655 Cmo-Chr9:3277220 0 tandem
Cmo09g00655 Cmo-Chr9:3277220 Cmo09g00656 Cmo-Chr9:3288325 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74573 PF00069 Pkinase 2.10E-46 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00655 - - cmo:103501834 1560.81