Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00672 ATGGCTTTGCTTTCTCAGATTCCGGCGTCGTTCTTCACTAAGAATCCCGAGCTCGCTCTCTCATCTGCCGTTAACACATCCAAGCTCACAAATTCCCCAAAAATCCAGCGAAGATGGTGCAATTTGGCAAGTCCTCCACGCCTCTCCTTCCAGTCGCCGGCCAGACTACGGCCGACGGCTGCTGTAACTATGATCTTGAACGAGGTTCTCAGGTTATACTCACCAGCGAGTATGCTTGGTCGACGTGTTAAAAAAGAAACAAAACTTGGAAATTTGACTATACCAGCCGGAGTGTTTTTGGGCTTACCAATTACTCTTCTCCATCGTGATCCTGAGTTATGGGGTGAAGATGCTGGCGAATTTAAACCAGAAAGATTTTCTAAGGGAGTTTCTAAAGCTACAAAAAATCCAAATGCTTTTATCCCATTTGGTTTGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCGCTATCAATTATCCTACAACGCTTCTCATTTGAGCTTTCTCCATCATATACTCATGCTCCCATTGCAGGTATAACAGTCCATCCTCAACATGGAGCTCATATCATACTACACAAACTGTAG 609 44.17 MALLSQIPASFFTKNPELALSSAVNTSKLTNSPKIQRRWCNLASPPRLSFQSPARLRPTAAVTMILNEVLRLYSPASMLGRRVKKETKLGNLTIPAGVFLGLPITLLHRDPELWGEDAGEFKPERFSKGVSKATKNPNAFIPFGLGPRICIGLNFAMIEAKMALSIILQRFSFELSPSYTHAPIAGITVHPQHGAHIILHKL 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3343664 3344961 - CmoCh09G006720.1 Cmo09g00672 388674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00672 202 Gene3D Cytochrome P450 27 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00672 202 SUPERFAMILY Cytochrome P450 61 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00672 202 PANTHER CYTOCHROME P450-LIKE 51 199 - -
Cmo09g00672 202 PRINTS E-class P450 group IV signature 150 168 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00672 202 PRINTS E-class P450 group IV signature 134 150 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00672 202 PRINTS E-class P450 group IV signature 59 75 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00672 202 Pfam Cytochrome P450 62 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00672 202 PRINTS P450 superfamily signature 141 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00672 202 PRINTS P450 superfamily signature 150 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00672 202 PRINTS P450 superfamily signature 64 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00672 202 PANTHER CYTOCHROME P450 FAMILY MEMBER 51 199 - -
Cmo09g00672 202 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 143 152 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00672 Cmo-Chr9:3343664 Cmo11g01041 Cmo-Chr11:5744782 2.30E-72 dispersed
Cmo09g00672 Cmo-Chr9:3343664 Cmo09g00674 Cmo-Chr9:3349383 1.04E-85 proximal
Cmo01g01333 Cmo-Chr1:10578058 Cmo09g00672 Cmo-Chr9:3343664 1.59E-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00672 - - csv:101222418 236.884