Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00674 ATGGCGTGTGTCACAGCCACGGTATCCATTTGGATAGTTGTGGTGGGTTTAGTCGTATTGGGAGGGAAAATTCTGAACTCTATTTGGTTTAGGCCCAAGAAACTAGAGAAGCTTTTAAGGCAGCAAGGACTAGCCGGAAATTCTTACCGGATTCTCTACGGAGACTTGAAGGACAGAGCCGCCATGAGGGAGCAGGCCATCTCCAAGCCGATGAACTTCTCTAATGATATTGCTCCACGTGTTACTCCTTCTATTCATCATACCATCCAGAAATATGGCAAGAATTCATTTATGTGGCTTGGCCCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAACTGTGTTTGCATTGTTCAATGATATCCAAAAGCCATCTATGAATCCCCTTGTCAAGTTGTTTGCAGGGGGACTTGTAAACCATGAAGGAGCAAAATGGGCCAAACACAGAAAGATAATCAATCCTGCATTTCATTTAGAAAAGCTTAAGGGTATGGTACCAGCATTCTATCATAGCTGCTACGACATGGTTAGCAAATGGGAAAGCATGGTCTCTGAGGAGGGATCGTGTGACCTAGATGTAATGCCTTATCTACAACAAATGGCTGCTGATGTGATTTCTCGAACAGCATTTGGGAGTAGCTATGAGAAAGGAAAAAAGATCTTCCAACTTCAAACTGAACTAGCTGATTTGGTGATTCAAACTATCATGAGGATTTATATTCCGGGATGGAGATTCCTACCCACAAAGTCGAACAAAAAAATGAAAGAGCTTAGTAAGGAGATATCATCTTTGATCTTGGGTATTATAAATGAACGGGAAAAGTCTATGAAGGCAGGTGAAGCTATGAATAGCGATCTATTAGGCATTCTCATGGAATCCAATTTGAACGAAATTGGACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTCATTGATGAATGCAAGATTTTCTATATTGCCGGCCAAGAAACTACAGCTACATTACTAATTTGGACGATGATACTGTTGAGTTCATACTCAGAATGGCAAGACCGAGCAAGGGCAGAGGTCTTTGAGATCTTCGGTAACAAGAATCCAGATTACGATGGTCTAAATCGACTAAAAGTTGTAACTATGATCTTCAACGAGGTTCTCAGGTTATACGCACCAGTGGGTTTGCTTGGACGACATGTTAAAAAAGAAACAAAACTTGGAAATTTGACTGTACCAGCCGGAGTGTTCCTGGGCCTACCAGTTCTTCTAATTCATCGTGATCCTGAGTTATGGGGTGAGGATGCGGACGAATTTAAACCAGAAAGATTTTCTGAGGGAGTTTCTAAAGCTACAAAAAATCCAGCTGCTTTTATCCCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCATTATCAATCATCCTACAACGCTTCTCATTTGAGCTTTCTCCATCGTATACTCATGCTCCCACCGGGTCTATAACAATCCAACCTCAACATGGAGCGCATATCATACTGCACAAACTGTAG 1554 41.57 MACVTATVSIWIVVVGLVVLGGKILNSIWFRPKKLEKLLRQQGLAGNSYRILYGDLKDRAAMREQAISKPMNFSNDIAPRVTPSIHHTIQKYGKNSFMWLGPIPRVHIMDPEQLKTVFALFNDIQKPSMNPLVKLFAGGLVNHEGAKWAKHRKIINPAFHLEKLKGMVPAFYHSCYDMVSKWESMVSEEGSCDLDVMPYLQQMAADVISRTAFGSSYEKGKKIFQLQTELADLVIQTIMRIYIPGWRFLPTKSNKKMKELSKEISSLILGIINEREKSMKAGEAMNSDLLGILMESNLNEIGQHGNNKDIGMSIEDVIDECKIFYIAGQETTATLLIWTMILLSSYSEWQDRARAEVFEIFGNKNPDYDGLNRLKVVTMIFNEVLRLYAPVGLLGRHVKKETKLGNLTVPAGVFLGLPVLLIHRDPELWGEDADEFKPERFSEGVSKATKNPAAFIPFGWGPRICIGLNFAMIEAKMALSIILQRFSFELSPSYTHAPTGSITIQPQHGAHIILHKL 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3349383 3352197 - CmoCh09G006740.1 Cmo09g00674 388676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00674 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Cmo09g00674 517 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 Pfam Cytochrome P450 88 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 Gene3D Cytochrome P450 74 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 513 - -
Cmo09g00674 517 PANTHER CYTOCHROME 13 513 - -
Cmo09g00674 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00674 517 SUPERFAMILY Cytochrome P450 80 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01333 Cmo-Chr1:10578058 Cmo09g00674 Cmo-Chr9:3349383 0 dispersed
Cmo09g00674 Cmo-Chr9:3349383 Cmo10g01116 Cmo-Chr10:7666891 0 dispersed
Cmo09g00678 Cmo-Chr9:3368556 Cmo09g00674 Cmo-Chr9:3349383 1.95E-21 dispersed
Cmo10g01114 Cmo-Chr10:7462670 Cmo09g00674 Cmo-Chr9:3349383 3.62E-107 dispersed
Cmo12g01254 Cmo-Chr12:11107044 Cmo09g00674 Cmo-Chr9:3349383 2.08E-137 dispersed
Cmo18g01115 Cmo-Chr18:11542537 Cmo09g00674 Cmo-Chr9:3349383 2.13E-120 dispersed
Cmo09g00672 Cmo-Chr9:3343664 Cmo09g00674 Cmo-Chr9:3349383 1.04E-85 proximal
Cmo09g00674 Cmo-Chr9:3349383 Cmo09g00675 Cmo-Chr9:3352944 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00674 - - csv:101222756 845.499