Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00676 ATGGAGTACTCATGGGTTGGGGCTGCCATTGCAGTGATAGCGAGCTTAATAGCAGTGTGGGTATCATGGGGTGCGTTGAACTGGGTTTGGATCAGGCCGAGGAAGCTCGAGAAGCGGCTGAGAGAACAAGGCCTGGCCGGAAACCCTTACCGGATTCTCTATGGGGACCTGAAGGAGAGCTTGGCGCTGTTGAAGGAGGCCAACTCCAAGCCTATGGCCTTCTCCCATGACATTGGTGCAAGGGTGTTGCCCTCCATCTCTAATGCCATCCAAAACCATGGAAAGAATTCATACATATGGCTTGGGCCATATCCGAGAGTAAACATCATGGATCCAGAGCAACTTAACGCTACCTTTTCTCTGATCAATGATATCCAAAAGCCAGATATGAACCCGTTCTTTAAGTTCCTTTTAGAGGGAATTATAACGCATGAAGGCGAAAAATGGGCTAAACATAGAAAGATTATCAACCCTGCGTTTCATTTGGATAAGTTGAAGAATATGGTACCAGTGTTTGTGGATAGCAGCAATGAGATAGTGAGTGAATGGGAAAGAATAGTCCCAGAAGATGGGTGCTGTGAGTTGGATGTAATGCCATATCTACAAAGCTTGACACGTGATGCCATTTCCAGAGCAGCATTTGGAAGTAGCTATAAGGAAGGACAAATGATCTTCCAGCTTCTTAAACAACTTACTGATTGGGTGGTTAAGGTTGCTGGTGGAATTTATATTCCTGGATGGAGGTTTCTACCAACAAAGTCCAACAATAAACTGAAAGAAACAAATGAAGAAATAAAAAGATTGGTTTTGGGTATCATAAACAAAAGGCAAAAGGCTATGAAGGAAGGTGAAGCTGTACAAAATGACTTATTGGGCATTCTCCTTGACTCCAATGCTAAAGAAATTGAAGCTCAAGGAAACAACAAAGACGTTGGAATGAGTATAGAAGATGTGATTAAAGAGTGCAAGATTTTCTACATTGGTGGCCAAGAAACCACAGCTCAGCTATTAACTTGGTCCATGATTTTGTTAAGCGTCTATACCGAGTGGCAAGAACGAGCTAGAGCAGAGGTTCGAGAAGTATTCGGTGACAACACTCCAAATTCGGATGGTTTAAGTCGTCTAAAAGTGGTAAATATGATTCTACACGAAGTTTTAAGGCTATATCCACCAGCAAGTATGCTTCCTCGTGTAGTTAAAAAGGAAACAAGAGTTGGAAAATTGAATCTACCAGCTGGAGTAATGTTAGTTGTACCCATGGTTCTTATCCATCGTGATCGTGAGATATGGGGTGAGGATGCGAATGAGTTTAAACCAGAAAGATTCAGCAATGGAGTTTCTAACGCATCAAAACAACAGCCTGCTTTCCTCCCCTTTGGATGGGGTCCTCGGATATGCTTGGGGCAGAACTTTGCGATTTTTGAGGCCAAAATCGCTCTATCCTTGATCCTACAACGTTTTTCGTTTGAGCTCTCTCCATCTTATACTCATGCTCCCATCGTGGTTATGTCTATTGAGCCTCAACATGGAGCTCATATCATTCTTCGCAAACTTAATAAGGTTTGA 1566 42.85 MEYSWVGAAIAVIASLIAVWVSWGALNWVWIRPRKLEKRLREQGLAGNPYRILYGDLKESLALLKEANSKPMAFSHDIGARVLPSISNAIQNHGKNSYIWLGPYPRVNIMDPEQLNATFSLINDIQKPDMNPFFKFLLEGIITHEGEKWAKHRKIINPAFHLDKLKNMVPVFVDSSNEIVSEWERIVPEDGCCELDVMPYLQSLTRDAISRAAFGSSYKEGQMIFQLLKQLTDWVVKVAGGIYIPGWRFLPTKSNNKLKETNEEIKRLVLGIINKRQKAMKEGEAVQNDLLGILLDSNAKEIEAQGNNKDVGMSIEDVIKECKIFYIGGQETTAQLLTWSMILLSVYTEWQERARAEVREVFGDNTPNSDGLSRLKVVNMILHEVLRLYPPASMLPRVVKKETRVGKLNLPAGVMLVVPMVLIHRDREIWGEDANEFKPERFSNGVSNASKQQPAFLPFGWGPRICLGQNFAIFEAKIALSLILQRFSFELSPSYTHAPIVVMSIEPQHGAHIILRKLNKV 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3358471 3363491 - CmoCh09G006760.1 Cmo09g00676 388678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00676 521 Pfam Cytochrome P450 90 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Cmo09g00676 521 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 8 514 - -
Cmo09g00676 521 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 SUPERFAMILY Cytochrome P450 79 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00676 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 514 - -
Cmo09g00676 521 Gene3D Cytochrome P450 76 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00676 Cmo-Chr9:3358471 Cmo10g01116 Cmo-Chr10:7666891 0 dispersed
Cmo09g00675 Cmo-Chr9:3352944 Cmo09g00676 Cmo-Chr9:3358471 0 tandem
Cmo09g00676 Cmo-Chr9:3358471 Cmo09g00677 Cmo-Chr9:3365428 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00676 - - cmax:111477005 917.146