Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00677 ATGTGGGTTGGACCGTGTCCAAGAGTACACATCATGGATCCAGAGCAACTTAAAGCTACGTTTTCTCTAATGGATGATATCCAAAAACCAGATAACAACCCGCTCATTGACTACCTTTTAGAGGGAATTATATCGCATGAAGGCCAAAAATGGGCTAAACACAGAAAGCTAATCAGCCCTGCATTTCATATGGATAAGTTGAAGAATATGGTACCAGCATTCGTGGATAGCAGCAATGAGATATTGAGTGAATGGGAAAGAATAGTCCCTGAAGAAGGGTGTTGTGAGTTGGATGTAATGCCATATCTACAAAACTTGTCACGTGATGCCATTTCAAGAACAGCATTTGGAAGTAGCTATAAGGAAGGACAGATGATCTTCCAGCTTATAAGACAACTCATTGATTTGGTGATTAAGGTTTCGGGTGGAACATATATTCCTGGATGGAGGTTTCTACCAACAAAGTCCAACAATAAACTGAAAGAAACAAATGAAGAAATAAAAAGATTGGTTTTGGGTATCATAAACAAAAGGCAAAAGGCTATGAAGGAAGGTGAAGCTGTACAAAATGACTTATTGGGCATTCTCCTTGACTCCAATGCTAAAGAAATTGAAGCTCAAGGAAACAACAAAGACGTTGGAATGAGTATAGAAGATGTGATTAAAGAGTGCAAGATTTTCTACATTGGTGGCCAAGAAACCACAGCTCAGCTATTAACTTGGTCCATGATTTTGTTAAGCGTCTATACCGAGTGGCAAGAACGAGCTAGAGCAGAGGTTCGAGAAGTATTCGGTGACAACACTCCAAATTCGGATGGTTTAAGTCGTCTAAAAGTGGTAAATATGATTCTACACGAAGTTTTAAGGCTATATCCACCAGCAAGTATGCTTCCTCGTGTAGTTAAAAAGGAAACAAGAGTTGGAAAATTGAATCTACCAGCTGGAGTAATGTTAGTTGTACCCATGGTTCTTATCCATCGTGATCGTGAGATATGGGGTGAGGATGCGAATGAGTTTAAACCAGAAAGATTCAGCAATGGAGTTTCTAACGCATCAAAACAACAGCCTGCTTTCCTCCCCTTTGGATGGGGTCCTCGGATATGCTTGGGGCAGAACTTTGCGATTTTTGAGGCCAAAATCGCTCTATCCTTGATCCTACAACGTTTTTCGTTTGAGCTCTCTCCATCTTATACTCATGCTCCCATCGTGGTTATGTCTATTGAGCCTCAACATGGAGCTCATATCATTCTTCGCAAACTTAATAAGGTTTGA 1272 40.41 MWVGPCPRVHIMDPEQLKATFSLMDDIQKPDNNPLIDYLLEGIISHEGQKWAKHRKLISPAFHMDKLKNMVPAFVDSSNEILSEWERIVPEEGCCELDVMPYLQNLSRDAISRTAFGSSYKEGQMIFQLIRQLIDLVIKVSGGTYIPGWRFLPTKSNNKLKETNEEIKRLVLGIINKRQKAMKEGEAVQNDLLGILLDSNAKEIEAQGNNKDVGMSIEDVIKECKIFYIGGQETTAQLLTWSMILLSVYTEWQERARAEVREVFGDNTPNSDGLSRLKVVNMILHEVLRLYPPASMLPRVVKKETRVGKLNLPAGVMLVVPMVLIHRDREIWGEDANEFKPERFSNGVSNASKQQPAFLPFGWGPRICLGQNFAIFEAKIALSLILQRFSFELSPSYTHAPIVVMSIEPQHGAHIILRKLNKV 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3365428 3367489 - CmoCh09G006770.1 Cmo09g00677 388679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00677 423 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 411 - -
Cmo09g00677 423 Pfam Cytochrome P450 2 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 SUPERFAMILY Cytochrome P450 1 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 PANTHER CYTOCHROME P450 72A11-RELATED 1 411 - -
Cmo09g00677 423 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 361 370 IPR017972 GO:0005506|GO:0016705
Cmo09g00677 423 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 PRINTS P450 superfamily signature 359 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 PRINTS P450 superfamily signature 282 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 PRINTS P450 superfamily signature 230 247 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 Gene3D Cytochrome P450 1 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 PRINTS E-class P450 group I signature 368 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 PRINTS E-class P450 group I signature 281 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 PRINTS E-class P450 group I signature 358 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 PRINTS E-class P450 group I signature 239 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00677 423 PRINTS E-class P450 group I signature 219 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00675 Cmo-Chr9:3352944 Cmo09g00677 Cmo-Chr9:3365428 0 dispersed
Cmo09g00677 Cmo-Chr9:3365428 Cmo10g01116 Cmo-Chr10:7666891 0 dispersed
Cmo09g00676 Cmo-Chr9:3358471 Cmo09g00677 Cmo-Chr9:3365428 0 tandem
Cmo09g00677 Cmo-Chr9:3365428 Cmo09g00678 Cmo-Chr9:3368556 3.03E-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00677 - - cmax:111477005 800.045