Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00678 ATGCCATACCTACAAGACATGACATGTGATGCCATTTCAAGAACAGCATTTGGAAGTAGCTATAAGGAAGGACAAATGATCTTCCAACTTCTTAAACAACTTATTGATTTGGTGGCTATGAAGGAAGGTGAAGCTGTACAAAATGACTTATTGGGCATTCTCCTTGACTCCAATGCTAAAGAAATTGAAGCTCAAGGAAACAACAAAGACTTTGGAATGAGTATTGAAGATGTGATTAAAGAGTGCAAGATTTTCTACATTGGTGGCCAAGAAACCACAGCTCAGCTATTAACTTGGACCATGATTTTGTTGAGCTTCCACACCGAGTGGCAAGAACGAGCTAGAGCCGAGGTTCGAGAAGTATTTGGTAACGACACTCCAAATTCAGATGGTTTAAATCGTCTAAAAGTGGTAAATATGATTTTACATGAAGTTCTAAGGTTATATCCACCGGCAAGTATGCTTCTTCGTGAGGTTAAAAAAGAAACGAGTGTTGGAAAATTGAATGTACCAGCTGGAGTAATGTTAATTGCACCTGTGATTCTTATCCATCGTGATCGTGAGATATGGGGTGAAGATGCGAATGAGTTTAAACCAGAAAGATTCAGCAATGGAGTTTCTAAAGCGTCAAAGTTGCAGCCTGCTTTCTTTCCCTTTGGATGGGGTCCTCGAATATGCATGGGACAGAACTTTGCGATTATGGAGGCCAAAGTTGCGATGTCCTTGATTCTACAACGTTTTTCATTTGAACTCTCTCCATCGTATGCTCATGCTCCCACTGTGGTTATGTCTGTTCAGCCTCAACATGGAGCTCATATCATTCTACGCAAACTTATGATAGCGAGCTTAATAGCAGTGTGGGTATCATGGGGTGCGTTGAACTGGGTTTGGATCAGGCCGAGGAAGCTCGAGAAGCGGCTGAGAGAACAAGGCCTGGCCGGAAACCCTTACCGGATCCTCCATGGGGACAATAAGGAGAGTTTGGCGATGTTGATGGAGGCCTACTCAAAGCCTATGGCCTTCTCCCATGACATTGGTGCAAGGGTGGTGCCCTCCATTTATAAAACCATCCAAAATTATGGTATGCATTTCCATCTTCCATTCGAAACCTAA 1113 42.86 MPYLQDMTCDAISRTAFGSSYKEGQMIFQLLKQLIDLVAMKEGEAVQNDLLGILLDSNAKEIEAQGNNKDFGMSIEDVIKECKIFYIGGQETTAQLLTWTMILLSFHTEWQERARAEVREVFGNDTPNSDGLNRLKVVNMILHEVLRLYPPASMLLREVKKETSVGKLNVPAGVMLIAPVILIHRDREIWGEDANEFKPERFSNGVSKASKLQPAFFPFGWGPRICMGQNFAIMEAKVAMSLILQRFSFELSPSYAHAPTVVMSVQPQHGAHIILRKLMIASLIAVWVSWGALNWVWIRPRKLEKRLREQGLAGNPYRILHGDNKESLAMLMEAYSKPMAFSHDIGARVVPSIYKTIQNYGMHFHLPFET 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3368556 3371715 - CmoCh09G006780.1 Cmo09g00678 388680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00678 370 PRINTS E-class P450 group IV signature 135 151 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 PRINTS E-class P450 group IV signature 79 105 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 PRINTS E-class P450 group IV signature 226 244 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 PRINTS E-class P450 group IV signature 210 226 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 37 - -
Cmo09g00678 370 PANTHER CYTOCHROME 277 367 - -
Cmo09g00678 370 PRINTS P450 superfamily signature 140 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 PRINTS P450 superfamily signature 226 237 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 PRINTS P450 superfamily signature 88 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 PRINTS P450 superfamily signature 217 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 Pfam Cytochrome P450 25 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 219 228 IPR017972 GO:0005506|GO:0016705
Cmo09g00678 370 PANTHER CYTOCHROME P450 FAMILY MEMBER 277 367 - -
Cmo09g00678 370 PANTHER CYTOCHROME 2 37 - -
Cmo09g00678 370 SUPERFAMILY Cytochrome P450 2 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00678 370 PANTHER CYTOCHROME P450 FAMILY MEMBER 38 275 - -
Cmo09g00678 370 PANTHER CYTOCHROME 38 275 - -
Cmo09g00678 370 Gene3D Cytochrome P450 1 279 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00678 Cmo-Chr9:3368556 Cmo09g00674 Cmo-Chr9:3349383 1.95E-21 dispersed
Cmo09g00677 Cmo-Chr9:3365428 Cmo09g00678 Cmo-Chr9:3368556 3.03E-176 tandem
Cmo09g00678 Cmo-Chr9:3368556 Cmo09g00679 Cmo-Chr9:3372091 1.41E-41 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00678 - - cmax:111477005 668.307