Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00697 ATGGCAATGATGAACTTCAAGCTTCAATGTCTTCTTCCAGCTTTTCTCCTTCTGTCTATTCTAGTTACTCCTTCAATCATAGCTGCAGGCTGCCAATGTCCTGAAGAGGAAGAAGAGGGAGGCGTTCGGAACAAAACCCTAGCCCTAAAATACAAAATCATCGCCATAGCTACCATTCTCCTTGCTGGAATCCTTGGGACGTTTGCTCCCTTACTCGGGAAGGTATTTCCGGCGTTGAGTCCTGACAAGGATATTTTCTTTGTCGTTAAAGCCTTCGCGGCTGGTGTCATATTGGCCACCGGATTCATCCATGTCCTTCCTGATGCCTACGAGAATCTGACGTCGCCGAAACTTAAAGAGAATCCTTGGGCGAAGTTTCCGTTCACTGGCTTGGTGTCTATGCTGGCTGCCATTGCCACTTTGATGGTGGACGCCGGTGCCAGTTCTTATTACACTAGGCTTCATCTGCATAAGGCTCAATCTGAGTCGAATGCCGATGAAGAGACGCATCCTGTAGGTCACCACGCTCATGCCTCTGCCGAATTCGTCGGATCATCCACGGAGATTCTCCGGCATCGGGTGATCTCTCAGGTATTAGAGCTTGGAGTTGTGGTACACTCTGTAATTATAGGGATTGGTATGGGTGTTTCTGAGACTCCAAGTACAATAAAACCTCTTGTGGCGGCCATCACTTTTCATCAGTTATTTGAAGGTATGGGCCTAGGAGGATGCATCGCCCAGGCAAAGCTCAGAACCAGGGCAGCGGTGATAATGGCAGTTTTCTTCTGCCTGACAACGCCAATTGGGATAGCAATAGGCATCGGAGTAACCAACAGCTACGACGAAGATAGCCCAACAGCACTGATAGTAGAGGGGATTTTGAATGCAGCCTCCTCTGGTATCTTAATTTATATGGCTCTTGTGGATCTTCTGGCTGCTGATTTTATGAGCCTTAGAATGCAGACCAATACAAAGCTTCAATTCATTGCTAATATTTTTCTCGTTCTTGGAGCTGCTTCGATGTCTTTACTTGCCATATGGGCTTGA 1047 47.28 MAMMNFKLQCLLPAFLLLSILVTPSIIAAGCQCPEEEEEGGVRNKTLALKYKIIAIATILLAGILGTFAPLLGKVFPALSPDKDIFFVVKAFAAGVILATGFIHVLPDAYENLTSPKLKENPWAKFPFTGLVSMLAAIATLMVDAGASSYYTRLHLHKAQSESNADEETHPVGHHAHASAEFVGSSTEILRHRVISQVLELGVVVHSVIIGIGMGVSETPSTIKPLVAAITFHQLFEGMGLGGCIAQAKLRTRAAVIMAVFFCLTTPIGIAIGIGVTNSYDEDSPTALIVEGILNAASSGILIYMALVDLLAADFMSLRMQTNTKLQFIANIFLVLGAASMSLLAIWA 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3443546 3444592 + CmoCh09G006970.1 Cmo09g00697 388699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00697 348 Pfam ZIP Zinc transporter 160 345 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cmo09g00697 348 PANTHER ZINC/IRON TRANSPORTER 20 348 - -
Cmo09g00697 348 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Cmo09g00697 348 PANTHER ZINC TRANSPORTER 1 20 348 - -
Cmo09g00697 348 TIGRFAM zip: ZIP zinc/iron transport family 36 348 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00697 Cmo-Chr9:3443546 Cmo11g02069 Cmo-Chr11:13998282 9.47E-122 dispersed
Cmo09g00695 Cmo-Chr9:3433722 Cmo09g00697 Cmo-Chr9:3443546 2.81E-84 proximal
Cmo09g00697 Cmo-Chr9:3443546 Cmo09g00698 Cmo-Chr9:3446176 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00697 K14709 - csv:101215851 471.085