Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00757 ATGCTCGATCGAACACTCCTGTGGCATCCGATTTTTGAGACAAGACTGCCGTGGATTATATTCGTGAATTTCATCATGTGTAGAAGTTTGTTGATTGCCTATCGACGGCCGGCGGCGAGAGGTATGGCGGCAGCGCTCGGTGGAGGTAGTGGTACCTGCGGCGGATTGATGTTCGGCAGTGGGGATGTGTCGAAGGCGCACGCGGCTATGGCTTTGGTGCAATTAATCAATGGAGGTTATCATGTTATCACCAAAGTCGCCCTTAATGTTGGGATGAATCAACTCGTCTTTTGTTTGTTCCGCGACTTGTTGGCTCTCACGATTCTTGCCCCTGTTGCTTATGTTCGGGAGAAGCGAGTTCGTTTGCCCATGACTCGAGAACTCTTCATATCGTTTTTCATTCTTGGTTTAACTGGGATTTTTGGTAACCAGCTTCTCTTTCTTGTTGGACTTGGCTACACTAATCCAACTTATGCTGCTGCCATACAGCCTTCCATTCCAGTTTTTACATTCCTTTTGGCTGTTATGATGGGCACAGAGTCTGTGAACTTACTTAAAGTGGAAGGACAGGCAAAGGTTGGCGGTACACTCGTTTGTGTCTCTGGTGCCATATTTATGGTTTTATTCCGTGGTCCAGCTTTGTTTGGGAACCCTGAATCTGATTTCGCGTCGCATAACGAAATAAGTGCAAGGGGTCAACCAGAGCCTGCCGGATGGCTATTGTCTAGCCTTCTGGAGTATGGATTGGATCATTTTCATATTGGGGTATTATGCTTGATAGGGAACTGTATGTGCATGGCTTGTTTCTTGGCTATCCAGGCACGGGTGTTAAAGAAGTATCCTGCCAACTTATCGGTCACGGCATATTCTTATTTATTTGGTGCTACATTGATGGTGATCACATCTTTCTTCATGACCAATGAATCCACAGACTGGAATTTGACGCAATCAGAGTTTTTCGCTGTCCTTTATGCTGGAATTTTTGCATCTGCCATCAATTATGGACTCTTGACATGGTGCAATAAGATATTGGGGCCTGCATTGGTCGCTCTTTACAACCCACTTCAACCTGCAGCATCTGCGCTGCTATCAAGAGTTTTCATAGGAAGCCCTATTTATCTCGGAAGTGTTTTGGGGGGCTCTCTTATAATTGCTGGTCTTTATTTGGTTACTTGGGCGTCACATAGGGAACGACAAACAACTCCAATTTTGCTTCCGCATTCAACCAGGTCCTCTGAACCACTTATTCATAAAGATGCATTGACTAACAAGATTGCATATCAGATAGGACAGATTTTCTCAGGCTCTACATCTTCACCCAAATCTGTAGATTAG 1335 45.09 MLDRTLLWHPIFETRLPWIIFVNFIMCRSLLIAYRRPAARGMAAALGGGSGTCGGLMFGSGDVSKAHAAMALVQLINGGYHVITKVALNVGMNQLVFCLFRDLLALTILAPVAYVREKRVRLPMTRELFISFFILGLTGIFGNQLLFLVGLGYTNPTYAAAIQPSIPVFTFLLAVMMGTESVNLLKVEGQAKVGGTLVCVSGAIFMVLFRGPALFGNPESDFASHNEISARGQPEPAGWLLSSLLEYGLDHFHIGVLCLIGNCMCMACFLAIQARVLKKYPANLSVTAYSYLFGATLMVITSFFMTNESTDWNLTQSEFFAVLYAGIFASAINYGLLTWCNKILGPALVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIAGLYLVTWASHRERQTTPILLPHSTRSSEPLIHKDALTNKIAYQIGQIFSGSTSSPKSVD 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3831540 3836890 + CmoCh09G007570.1 Cmo09g00757 388759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00757 444 PANTHER WAT1-RELATED PROTEIN 64 436 - -
Cmo09g00757 444 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 397 - -
Cmo09g00757 444 Pfam EamA-like transporter family 254 391 IPR000620 GO:0016020|GO:0016021
Cmo09g00757 444 Pfam EamA-like transporter family 70 189 IPR000620 GO:0016020|GO:0016021
Cmo09g00757 444 SUPERFAMILY Multidrug resistance efflux transporter EmrE 101 209 - -
Cmo09g00757 444 PANTHER WAT1-RELATED PROTEIN 64 436 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00757 Cmo-Chr9:3831540 Cmo09g00123 Cmo-Chr9:572730 9.57E-71 dispersed
Cmo09g00757 Cmo-Chr9:3831540 Cmo12g00386 Cmo-Chr12:2398747 1.13E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00757 - - csv:101222886 721.465