Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00775 ATGATCGATGAGCTGTGGCGCTGTGAGAAAGGCGACACCTCCATCTTAGCGTTTCGCCTGCTCCCTGACATCACTCCGGCAACTCCCTCACCCGAAGGATCACTCGAAAGTCGAATCAACTCCTACAAGATCTCTCTCTCTTTCTCTGTGTATATACGGCTAGTTGTCGGCGGCGGAGGTGATTCGCGATGTCGGAAGACGCGGAGCTATGAGTGGAGAGTATCGCAGCTTGAGAGCATCTTGAAGCTTAGCGCTGACCATGAGGAAGAGATCAGCGATGCGATTCATTCAGACCTCTCCAAGCCTGCGTTGGAATCCATCATTCATGAGATAGGCATGGTAAAAAATTCGTGTAAATTGGCACTTAAAGAACTTCGGCGTTGGATGACACCAGAGAAGGTTCAAACTACAATTACCACTTTTCCTTCGTCTGCTGAAATTGTACCAGAACCTTTGGGTGTTGTGCTGATCATTTCTCCTTGGAATTATCCATTCTTTTTATCTCTCGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAACAACATCATCTTTAGTGGCTAAACTTTTAGTGAAGTATTTGGATACTTCTGCCGTAAAAGTTGTCGAGGGTGCTGTTCCCGAAACTTCTGCTTTGCTTGAGCAAAAGTGGGACAAGATATTTTACACAGGCAACGGGAGAGTGGGGCGTATAGTGATGGCAGCTGCTGCCAAGCACCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTGGACTCAAAAATCAATTTACAAGTTGCGTGTCGGCGGATTATTGCTGGTAAGTGGGGTGGTAACAATGGACAAGCATGTGTTTCTCCTGATTATATCATAACTACGAAAGAAGTTGCTCCAAAATTGGTGGAGTCCCTAAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCATTGGAATCTAAAGATTTATCTCGCATTGTGAATGCCAACCACTTTGATCGCTTGACAAAGCTCTTGGATGATGATAAAGTTTCTGGCAAGATTGTGCTTGGAGGTGAAAAGGACAAATCCAAATTGCAGATTGCTCCCACCCTCTTACTGGATGTCCCTCGAGACTCTCTGATTATGACAGAGGAGATATTTGGTCCCTTACTTCCCATTATCACTGTAGACAAACTGGAGGACTGCTTCGAAATAGTGAATTCGGTCCCAAAGCCACTGGCAGCATATTTATTTACCAGCAATAAAAAGCTCAAGGAACAGTTCGTGGCTTGCATCTCTGCAGGGGCTGTGGTTATCAATGACACCACATTACATCTGGCAGTTAGCACACTACCATTTGGAGGAGTTGGGGAGAGTGGAATGGGAGCTTACCATGGGAAGTTCTCATTTGATGCATTTAGCCATAAGAAGGCTGTTCTATATCGAAGTTTTGCAGGCGATGTGGCGATGAGATACCCGCCTTACACACCGGGAAAGCTAAGATTTCTGAAAGCTCTTCTTGGAGGTGGCATATTGGGACTCATTCGTGCTCTTCTTGGTTGGTCGTAA 1572 45.29 MIDELWRCEKGDTSILAFRLLPDITPATPSPEGSLESRINSYKISLSFSVYIRLVVGGGGDSRCRKTRSYEWRVSQLESILKLSADHEEEISDAIHSDLSKPALESIIHEIGMVKNSCKLALKELRRWMTPEKVQTTITTFPSSAEIVPEPLGVVLIISPWNYPFFLSLDPVVGAIAAGNAVVLKPSEISPTTSSLVAKLLVKYLDTSAVKVVEGAVPETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKINLQVACRRIIAGKWGGNNGQACVSPDYIITTKEVAPKLVESLKQELERFYGKNPLESKDLSRIVNANHFDRLTKLLDDDKVSGKIVLGGEKDKSKLQIAPTLLLDVPRDSLIMTEEIFGPLLPIITVDKLEDCFEIVNSVPKPLAAYLFTSNKKLKEQFVACISAGAVVINDTTLHLAVSTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDVAMRYPPYTPGKLRFLKALLGGGILGLIRALLGWS 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3940010 3945582 - CmoCh09G007750.1 Cmo09g00775 388777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00775 523 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 260 460 IPR016163 GO:0016620
Cmo09g00775 523 PIRSF ALDH 38 513 IPR012394 GO:0006081
Cmo09g00775 523 Pfam Aldehyde dehydrogenase family 70 480 IPR015590 GO:0016491
Cmo09g00775 523 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 478 IPR016162 GO:0016491
Cmo09g00775 523 PANTHER ALDEHYDE DEHYDROGENASE 65 523 IPR012394 GO:0006081
Cmo09g00775 523 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 256 263 IPR029510 GO:0016491
Cmo09g00775 523 SUPERFAMILY ALDH-like 66 496 IPR016161 GO:0016491
Cmo09g00775 523 PANTHER ALDEHYDE DEHYDROGENASE 65 523 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00775 Cmo-Chr9:3940010 Cmo16g00705 Cmo-Chr16:3511971 5.34E-160 dispersed
Cmo09g00775 Cmo-Chr9:3940010 Cmo09g00776 Cmo-Chr9:3947115 0 tandem
Cmo01g01433 Cmo-Chr1:11208760 Cmo09g00775 Cmo-Chr9:3940010 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00775 K00128 - csv:101219569 798.119