Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00776 ATGGCGGAGAGAGCGGTGTTTGACGGAGAAGCGGCAGAGAGAGTGGTGGCGAAGCTGAGGGAGAGCTATAATTCCGGGAAGACGCGAAGCTACGAATGGAGAGTGAATCAATTGAAGAATCTGTTGAAGTTGATCGAAGAAAACGAGGAAGAGATGGTCGATAAGATCCATTCGGATCTCCATAAACCCGAACCCGAAGCCTTCGCCCATGAGGTAGGTCTGTTAAAAAATTCGTGTCAATTGGCACTTAAAGAACTTAGGCATTGGATGGCACCAGAAAAGGTTAAAACTTCAATTACCATATTTCCTTCGTCTGCTGCAATTGTACCAGAACCTTTGGGTGTTGTCCTGATAATTTCAGCCTGGAATTATCCATACTTGGTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCATCGACATCATCTTTAATGGCTAAACTTTTAGGGAAGTATTTGGATACTTCTGCTGTAAGAGTTGTTGAAGGTGCTGTTCCCGAAACTTCTGCTTTGCTTGAGCAAAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTAGGGCGAATAGTGATGGCAGCTGCTGCCAAGCACCTTACGCCAGTTGTATTAGAGCTTGGAGGAAAATCTCCAGTGGTAGTTGATTCAGAAATCAATTTACAAGTTGCGAGTAGGCGGATTATTTCTGGTAAGTGGGGTTGCAACAATGGACAAGCATGCGTTTCTCCTGATTATGTTATAACTACCAAAGAATTTGCTCCAAAATTGGTGGAGTCCCTGAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCATTGGAAACTAAAGATTTATCTCGCATTGTGAATGCTTACCACTTTGATCGCTTGATAAAACTCTTAGAGGATGATAAAATTTCTGGCAAGATTGTGCATGGTGGTGAAAAGGACAAATCCAAATTGCAGATTGCTCCCACTCTCCTAGTGGATGTTCCTCGAGACTCTCTGATTATGACGGAGGAGATATTTGGTCCCTTACTTCCCATTCTCACGGTCGACAAAGTGGAGGACAGCTTTGAAGTAGTCAACTCGGGCTCGAAGCCACTTGCAGCATATTTATTTACCAACAATAAGAAGCTCAAGGAACGGTTCGTGGCCTGTATCTCTGCAGGGGCCATAGGCATCAATGATACCGCCTTACAGCTGTCGGTTAACACACTACCATTCGGAGGAGTTGGGGAGAGTGGAATGGGAGCTTACCATGGGAAGTTCTCATTTGATGCATTTAGCCATAAGAAGGCTGTTCTTTATCGAATTTTCGCAGGCGACGTGCCGATGAGATACCCGCCTTACTCAAACGAAAAGCTACGATTTCTGAAAGCTCTTCTCGGAGGTAGCCTATTGGAACTCATTCGTGCTCTTCTTGGTTGGTAG 1452 44.21 MAERAVFDGEAAERVVAKLRESYNSGKTRSYEWRVNQLKNLLKLIEENEEEMVDKIHSDLHKPEPEAFAHEVGLLKNSCQLALKELRHWMAPEKVKTSITIFPSSAAIVPEPLGVVLIISAWNYPYLVSLDPVVGAIAAGNAVVLKPSEISPSTSSLMAKLLGKYLDTSAVRVVEGAVPETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASRRIISGKWGCNNGQACVSPDYVITTKEFAPKLVESLKQELERFYGKNPLETKDLSRIVNAYHFDRLIKLLEDDKISGKIVHGGEKDKSKLQIAPTLLVDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEVVNSGSKPLAAYLFTNNKKLKERFVACISAGAIGINDTALQLSVNTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRIFAGDVPMRYPPYSNEKLRFLKALLGGSLLELIRALLGW 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3947115 3954080 - CmoCh09G007760.1 Cmo09g00776 388778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00776 483 Coils Coil 35 55 - -
Cmo09g00776 483 PIRSF ALDH 2 478 IPR012394 GO:0006081
Cmo09g00776 483 PANTHER ALDEHYDE DEHYDROGENASE 3 483 - -
Cmo09g00776 483 SUPERFAMILY ALDH-like 13 458 IPR016161 GO:0016491
Cmo09g00776 483 Pfam Aldehyde dehydrogenase family 8 441 IPR015590 GO:0016491
Cmo09g00776 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 439 IPR016162 GO:0016491
Cmo09g00776 483 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Cmo09g00776 483 PANTHER ALDEHYDE DEHYDROGENASE 3 483 IPR012394 GO:0006081
Cmo09g00776 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01433 Cmo09g00776 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01433 Cmo-Chr1:11208760 Cmo09g00776 Cmo-Chr9:3947115 0 dispersed
Cmo09g00776 Cmo-Chr9:3947115 Cmo16g00705 Cmo-Chr16:3511971 3.30E-164 dispersed
Cmo09g00775 Cmo-Chr9:3940010 Cmo09g00776 Cmo-Chr9:3947115 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00776 K00128 - csv:101219329 815.839