Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo09g00792 | ATGGGTGCTGACACTGGCCTTGCTATGTTTTGTGGTCTCATTCATAAAATCAAACCCTACTTAGCTATGATCTCCTTGCAATTCGGCTACGCCGGGATGTACATCGTTACCATGCTGTGTTTCAAAAAGGGTATGAACCATTACGTTCTTGCTGTCTATCGACACGTCGTTGCCACCATTGTCATCGCTCCATTCGCTTTCGTCCTTGAAAGGAAAATAAGGCCGAAGATGACATTCCCGATTCTCGCTCGGATATTGGCGCTCGGCTTTCTCGAGCCTGTGTTGGATCAAAATTTGTACTATGTGGGTCTGAAACTTACCTCAGCAACATTCACCTCTGTCACTATCAATATTCTTCCTGCTGTTACCTTCATTATGGCTCTCATTTTCAGGCTAGAAAGAGTGAACTTCAAGAAGGTTCGTAGCATTGCAAAGGTGGTCGGAACATTGGTGACGATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCCATCGTCGACATCTTCCACGGCCAAGGACGCCATGCCGCCCACCAAAGCAGCGGCAGCGAATCCTCCGACCAGCACTGGGTCCTCGGCACTCTCATGCTCCTTGGCAGCATCGTCGGTTGGTCCGGCTTCTTCATCTTACAATCGTTCACACTGAAGAAATACCCGGCAGAGCTGTCGTTGACCGCCTTGATATGTGTAGCCGGCACGGTGGAGGGCTCCATTGTTACCCTTATTATGGAGCGCGACATGAGCGTCTGGGTCATCGGCTGGGACTCTCGGCTTCTCGCCGCCGTTTACACCGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGCGTGGTAATTCGTGAACGTGGCCCTGTTTTTGTTACCTCTTTTACCCCTCTCTGTATGATTATTACCGCCATCCTTGGCTCCATTGTTTTGGCCGAGCAAATTCACCTCGGAAGCATAATCGGAGCCATTTTCATAGTGATGGGACTATACTTAGTGGTATGGGGCAAAGCCAAGGACCATATAAACAAACCGACGAACCAAAAAAGCGGCGCCGCCACTGAATTACCGATCACCGCCGAGCCGGAAACCACCACCACCACTCTCTCCGCCGAGCGCTGCTCTTCCAAGGCTCCACCGGCGTGA | 1137 | 50.66 | MGADTGLAMFCGLIHKIKPYLAMISLQFGYAGMYIVTMLCFKKGMNHYVLAVYRHVVATIVIAPFAFVLERKIRPKMTFPILARILALGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLERVNFKKVRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGQGRHAAHQSSGSESSDQHWVLGTLMLLGSIVGWSGFFILQSFTLKKYPAELSLTALICVAGTVEGSIVTLIMERDMSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAILGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHINKPTNQKSGAATELPITAEPETTTTTLSAERCSSKAPPA | 378 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 4054770 | 4057634 | - | CmoCh09G007920.1 | Cmo09g00792 | 388794 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo09g00792 | 378 | PANTHER | WAT1-RELATED PROTEIN | 13 | 357 | - | - | |
| Cmo09g00792 | 378 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 53 | 162 | - | - | |
| Cmo09g00792 | 378 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 251 | 335 | - | - | |
| Cmo09g00792 | 378 | PANTHER | WAT1-RELATED PROTEIN | 13 | 357 | IPR030184 | GO:0016021|GO:0022857 | |
| Cmo09g00792 | 378 | Pfam | EamA-like transporter family | 193 | 331 | IPR000620 | GO:0016020|GO:0016021 | |
| Cmo09g00792 | 378 | Pfam | EamA-like transporter family | 21 | 147 | IPR000620 | GO:0016020|GO:0016021 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo04g02464 | Cmo09g00792 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo04g02464 | Cmo-Chr4:18217217 | Cmo09g00792 | Cmo-Chr9:4054770 | 3.26E-140 | dispersed | |
| Cmo07g01014 | Cmo-Chr7:5018602 | Cmo09g00792 | Cmo-Chr9:4054770 | 2.24E-131 | dispersed | |
| Cmo09g00792 | Cmo-Chr9:4054770 | Cmo18g00829 | Cmo-Chr18:9683649 | 1.63E-123 | dispersed | |
| Cmo10g00283 | Cmo-Chr10:1264072 | Cmo09g00792 | Cmo-Chr9:4054770 | 7.98E-86 | dispersed | |
| Cmo15g01405 | Cmo-Chr15:9569938 | Cmo09g00792 | Cmo-Chr9:4054770 | 9.82E-86 | dispersed | |
| Cmo20g01088 | Cmo-Chr20:10336094 | Cmo09g00792 | Cmo-Chr9:4054770 | 2.40E-74 | dispersed | |
| Cmo01g01443 | Cmo-Chr1:11262018 | Cmo09g00792 | Cmo-Chr9:4054770 | 3.84E-147 | wgd | |
| Cmo04g02463 | Cmo-Chr4:18212099 | Cmo09g00792 | Cmo-Chr9:4054770 | 6.29E-143 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo09g00792 | - | - | csv:101216002 | 655.595 |