Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00846 ATGACTGGGAAAGAGATTCTCCACAAGATGAAGGTATTGTACTTACTTGCCATTGGTGAAAAAGTTGGGCTCGGCTCGTCCGATCCGGACTCAGGAAAAGGAAAGAGCAAGATGTCGAAGCATGTCACACATGGTTATCATTTGGTGAAAGGGAAATCGAACCATGCCATGGAAGATTACGTGGTTGCCGAGTTTAAGCAAGTTGATCATCATGAGCTGGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAACTCTATCCCTGATTATTTACAGTCCCATCTATTTGCTAATATCATAAACGAGCCTGATTTCTGGACGAACCCAACGGACGCAGTCAGGAAAGCATACGAGGCAACCGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCGACTGCTGTTACAGCCATATTGATTGACTGTAAGAAACTAGTAGTCGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTCGTAACGGTAAAGCCAGTCAATTATCAATCGATCACGAACCGAGCGTTGAAAGAAAAAGCATCGAGGACAGAGGTGGTTTCGTTTCAAACTTTCCTGGAGATGTTCCACGTGTCGACGGGCAGTTGGCGGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCATACGTGGTTGTGGAGACGATCGACGACGAGACCGAATTGGTTATCTTAGCAAGCGACGGATTGTGGAAGGTTATGTCGAACGAGGAAGCCGTAGAGTCGATCAGGCATCTGAAAGACGCTCAAGCAGCTGCCAAACACCTGACAGAAGAGGCCCTCAAGAGGAAGAGCAGAGATGATATTTCTTGTATAGTTGTGAGATTTCTGTGA 876 46.12 MTGKEILHKMKVLYLLAIGEKVGLGSSDPDSGKGKSKMSKHVTHGYHLVKGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFANIINEPDFWTNPTDAVRKAYEATDAYILEKAVDFSHGGSTAVTAILIDCKKLVVGNVGDSRAVICRNGKASQLSIDHEPSVERKSIEDRGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVVETIDDETELVILASDGLWKVMSNEEAVESIRHLKDAQAAAKHLTEEALKRKSRDDISCIVVRFL 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4340957 4343909 + CmoCh09G008460.1 Cmo09g00846 388848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00846 291 ProSitePatterns Glycosyl hydrolases family 5 signature. 95 104 IPR018087 GO:0004553|GO:0005975
Cmo09g00846 291 CDD PP2Cc 44 290 IPR001932 -
Cmo09g00846 291 Pfam Protein phosphatase 2C 55 283 IPR001932 -
Cmo09g00846 291 ProSiteProfiles PPM-type phosphatase domain profile. 43 290 IPR001932 -
Cmo09g00846 291 PANTHER PROTEIN PHOSPHATASE 2C 1 290 IPR015655 GO:0004722|GO:0006470
Cmo09g00846 291 Gene3D - 37 291 IPR036457 -
Cmo09g00846 291 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 290 - -
Cmo09g00846 291 SUPERFAMILY PP2C-like 39 290 IPR036457 -
Cmo09g00846 291 SMART PP2C_4 35 288 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00846 Cmo-Chr9:4340957 Cmo16g00270 Cmo-Chr16:1199573 5.08E-102 dispersed
Cmo11g01995 Cmo-Chr11:13667941 Cmo09g00846 Cmo-Chr9:4340957 1.67E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00846 K17506 - csv:101215129 499.59