Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00885 ATGATGTTATCTGCATCGCCATCGACGATAGTTCGAAGCTCACTGGAGGAAATGCTTGATTCTCTTCGACGAAGGGATGAGATTGAGATACCTAAAGACTTGCCGCCGGCATTGCCGTCTCGGCCCACTTCTAAGGCTCGGATTCCGCCGCTGCGGCGGGCTTTACCCGTTAATTTCAAGGTTAATGGCGACGGTTCCTCTGAGTGCTGTGTTAATGGTTTCAATGGAAGGGAAGATCCATTGAGGAAGGAGAATGGTCTGGCTAACTTTGCATTAAGGAGAGTGAAGAGAGATCAAGGCGATGAATCGCCTTACTTGGTTGCTTCAGAGAAGGATAATGAAGATCAAGTGAATGGTCCGTATGGTTCTTCTCCAGAAGGGTCTAACTGGGAGGAGATTATCCGCTATTTTCTCCATAAGAAACTCCGGGTTTGGTGTCAAATTCCATCTGGACAATGGGAGTTAGGAACTATACAATCAAACAGTGGGGCTGAGGCATCTGTCATGCTCTCAAACAATAAGGTTATTAAAGTTTCGACGGTAGATCTTTTACCTACGAATCCCGATATCGTGGAGGGGGTTGATGATCTTGTACAGCTTGGTTATTTGAACGAGCCCTCGGTTGTTAACAGTCTTCAGCAACGATTTTCTCGAGATGAAATTTATTGTAATGCAGGGTCAGTTTTGATTGCTGTTAATCCCTTGAAAGACACTAAACAGTATGGAGACGGATTGATTACAGCTTATAGAGAGAGAGTCATGAATGACCCCCATGTTTATGCTGTAGCAGATGCTGCCTATTCTGGGATGATGCAAGATGAAGTTAATCAATCTATTATCATCAGTGGTGAAAGTGGAGCAGGAAAAACTGAGACAGCAAAAGCTGCACTTCAGTACCTGACTGCTCTTGGCGGTGGCAGTGGCATAGTCGATAGAATCCCACGGGCTAACGTTATCCTGGAAGCATTCGGGAATGCTAAAACCTCCAGAAACAACAATGCCAGCAGATTTGGGAAGCTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTTCGAGAGTCGCTCAGCTGGTCAATGGCGAGAGATCGTTCCATGTCTTCTATCAACTTTGTGCTGGAGCGCCATCTACACTTAAAGAGAAATTGAATCTCAGAATGGCCAGTGAGTACAGTTACCTTAATCACAGTGAATGCCTCGTGATCGGTGGTGTGGACGATGCACAGAAATTTCATGTTCTTGTGGAAGCTCTAGATATGCTTCAATTCACAAAAGAAGATCAAGAGCATGCATTTCGTTTGCTTGCTGCAGTTTTGTGGATAGGGAACATTACGTTTCAAACGATTAATAGTGAAAATCATGTGGAGGTCGTCATGGCTAATGAAGCGGTCGCAAACGCTGCCGAGCTGATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCAACTCCAACATGCAATCGGACATTACGACAGGCAACTGATGCGAGAGATGCATTGGCAAAATTCATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAACTCACTTAAACCAAGAAGGGAGCACTCTGGAAGATCCATAAATATCCTCGACTTCTACGGGTTTGAGTCACTTAAGAAGAACGGCTTCGAACAGTTCTGTATCAATTATGCAAATGAAAGACTGCAGCAGCATTTTATTCGGCACCTGTTCAAACTTCAGCAGGAGGACTACGAATTTAATGGGGTCGATGGCACCAAACTCAACTTCAAAGACAATCAAGAGTGTTTGAATCTTATCGAGAAGAAACCTATCGGAGTTCTAGCTTTGTTGGACGAAGAGTTGAGTTTTCCCAAGGCTACAGATCTGACATTTGCTAATAAACTAAAGCAACACTTCAAATCTCATCCTCGCTTTAAAGGCGAGAGAGGCAGGGCTTTTGGCGTTCGCCATTATGCTGGAGAGGTTGTATACGATACCAATGGGTTTTTGGAAAAGAATAGAGATATGCTGCATTCAGATTCCATCCAACTCTTTTCATCATGTTCTTGCAAGCTACTGCAATTATTTGCCTCAAAAATGGTTAACCATTCCCACAAACCAACAGTTTCAATGTGTTCTACAGAAGTAGTACAATCTCCCGAGCCAGGCACTGGTACCAAGTACAAGGTTCTACTATGTGACCTATTTCGTAAATTGGAGCGCACCGGCCATCATTTCATTTGTTGCATAAGACCAAACAGGAATCAAGTTTGTGGCGTATTCGAGGAGGATCTCGTCTTACAGCAGCTTAGATACTGTGGAATTTTGGAGGTTGTCAGAATTTCAAGATCTGGTTATCCTACCAGAATGATGCATCAAGAATTTGCTGAAAGGTTCGGATTCTTCCTTAAAAAAGCTGGTGTATCCCGAGATCCGTTGAGTATATCAATGGCTGTTTTGCAACGATTTAACGTCCACCCCCATATGTACCATGTTGGTTATACCAAGCTATTTTTCCGAGCTGGGCAGATTAGGGCATTGGAGGAAAGGAGGAAGCAAGTTGTACAAGGCGTCCTAGCGGTTCAAAAGTACTTTCGTGGTTGCCGTTCCCGTGGCCACTTCCTTCAACTTAAGCAAGCAGCAACTACCTTAGAATCACTTATTCGTGGCGAAAATGCCAGAAGGAGATGTACCGTTAATGTGCCGAGGTTCTCATTCGTTGTTTATGCTTCCGGTGTTCCTAAGAAAGTTTACGAGCTGCAAGCAGTCATACGAATACAATCGGCTATACGTGGATCGTTGACTCGAAAGCATTACAAGAGCATACTGAGCTCTTTTCGAGAAAACAGAATGTCTAAACTGAACGCAGACAGGAGAGCTTCAGAGGACAAACTTCAAGAACAGGTTGAATCCCTAACAACAACTGTGGGTGAGCTTCAAAAGAGGGTTGTGATGGCAGAAGCAGCCATGGAGAAAAAGGAAGAGGAAAATGCTGCACTGAGGGAGAAAGTAAAGCAATTTGAGTGTATGCGGTCAGAATATGATGCCAAGATGAAATCCATGGAGGATATGTGGCAAAAGCAGACGGCTTCTTTGCAAATGAGTCTTGCTGTTGCTAAAAGGACTCTTGCTGCTGCTGAAAATGTAGCCTGTCCGCTCGGAAGAGTTGATGTTGCTAATTCACCGCCTCACTATTACGATTCTGAGGATATGACGTCGATGGGATCTCGAACTCCCGGTGGTACCACGCCTGTAAAAGCCTTTGGAATCTCTGAGGTTGGAGCAGGGCGAGAAATGAACGGTGCTTTATTTGCAGTGAGCACTCTTGTAAGGGAATTTGAACAGAGAAGAATCGCATTTGATAACGATGCGAAAGCTTTAATTGAATCGAAATCAAGTCATGCACAAACACGGTCTAATATGAATCCAGAAGAAGAATACCGTAAAATTAAAGTCCGATTTGAAGCATGGAAGAAAGAGTACAAGGTAAGATTACGGGAAATGAAAGGAAAGGTTCATAAATACGGTCATTTTGAGGTCGATAAACTTCGTCGAAAATGGTGGGGGAAGTTGAGCTCAAGATCATCATCATAG 3576 43.71 MMLSASPSTIVRSSLEEMLDSLRRRDEIEIPKDLPPALPSRPTSKARIPPLRRALPVNFKVNGDGSSECCVNGFNGREDPLRKENGLANFALRRVKRDQGDESPYLVASEKDNEDQVNGPYGSSPEGSNWEEIIRYFLHKKLRVWCQIPSGQWELGTIQSNSGAEASVMLSNNKVIKVSTVDLLPTNPDIVEGVDDLVQLGYLNEPSVVNSLQQRFSRDEIYCNAGSVLIAVNPLKDTKQYGDGLITAYRERVMNDPHVYAVADAAYSGMMQDEVNQSIIISGESGAGKTETAKAALQYLTALGGGSGIVDRIPRANVILEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGASRVAQLVNGERSFHVFYQLCAGAPSTLKEKLNLRMASEYSYLNHSECLVIGGVDDAQKFHVLVEALDMLQFTKEDQEHAFRLLAAVLWIGNITFQTINSENHVEVVMANEAVANAAELMGCSPNELKLVLSTPTCNRTLRQATDARDALAKFIYASLFDWLVEQINNSLKPRREHSGRSINILDFYGFESLKKNGFEQFCINYANERLQQHFIRHLFKLQQEDYEFNGVDGTKLNFKDNQECLNLIEKKPIGVLALLDEELSFPKATDLTFANKLKQHFKSHPRFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDMLHSDSIQLFSSCSCKLLQLFASKMVNHSHKPTVSMCSTEVVQSPEPGTGTKYKVLLCDLFRKLERTGHHFICCIRPNRNQVCGVFEEDLVLQQLRYCGILEVVRISRSGYPTRMMHQEFAERFGFFLKKAGVSRDPLSISMAVLQRFNVHPHMYHVGYTKLFFRAGQIRALEERRKQVVQGVLAVQKYFRGCRSRGHFLQLKQAATTLESLIRGENARRRCTVNVPRFSFVVYASGVPKKVYELQAVIRIQSAIRGSLTRKHYKSILSSFRENRMSKLNADRRASEDKLQEQVESLTTTVGELQKRVVMAEAAMEKKEEENAALREKVKQFECMRSEYDAKMKSMEDMWQKQTASLQMSLAVAKRTLAAAENVACPLGRVDVANSPPHYYDSEDMTSMGSRTPGGTTPVKAFGISEVGAGREMNGALFAVSTLVREFEQRRIAFDNDAKALIESKSSHAQTRSNMNPEEEYRKIKVRFEAWKKEYKVRLREMKGKVHKYGHFEVDKLRRKWWGKLSSRSSS 1191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4595995 4603786 + CmoCh09G008850.1 Cmo09g00885 388887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00885 1191 CDD MYSc_Myo8 206 834 IPR036022 -
Cmo09g00885 1191 PRINTS Myosin heavy chain signature 276 301 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo09g00885 1191 PRINTS Myosin heavy chain signature 222 241 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo09g00885 1191 PRINTS Myosin heavy chain signature 533 561 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo09g00885 1191 PRINTS Myosin heavy chain signature 318 345 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo09g00885 1191 PRINTS Myosin heavy chain signature 586 614 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo09g00885 1191 MobiDBLite consensus disorder prediction 101 125 - -
Cmo09g00885 1191 ProSiteProfiles Myosin motor domain profile. 192 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo09g00885 1191 Gene3D - 365 421 - -
Cmo09g00885 1191 Pfam Myosin head (motor domain) 194 834 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo09g00885 1191 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 139 188 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cmo09g00885 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 937 IPR027417 -
Cmo09g00885 1191 SMART iq_5 912 934 IPR000048 GO:0005515
Cmo09g00885 1191 SMART iq_5 847 869 IPR000048 GO:0005515
Cmo09g00885 1191 SMART iq_5 870 892 IPR000048 GO:0005515
Cmo09g00885 1191 Coils Coil 956 1004 - -
Cmo09g00885 1191 Gene3D Kinesin motor domain 191 779 IPR036961 -
Cmo09g00885 1191 Gene3D - 545 736 - -
Cmo09g00885 1191 Pfam IQ calmodulin-binding motif 915 934 IPR000048 GO:0005515
Cmo09g00885 1191 Gene3D Myosin VI head, motor domain, U50 subdomain 422 522 - -
Cmo09g00885 1191 ProSiteProfiles IQ motif profile. 913 942 IPR000048 GO:0005515
Cmo09g00885 1191 MobiDBLite consensus disorder prediction 27 46 - -
Cmo09g00885 1191 SMART MYSc_2a 186 847 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo09g00885 1191 PANTHER MYOSIN-2 ISOFORM X1 121 1188 - -
Cmo09g00885 1191 PANTHER MYOSIN 121 1188 - -
Cmo09g00885 1191 Gene3D - 851 894 - -
Cmo09g00885 1191 Gene3D - 780 847 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01333 Cmo-Chr4:6791952 Cmo09g00885 Cmo-Chr9:4595995 0 dispersed
Cmo09g00885 Cmo-Chr9:4595995 Cmo18g00813 Cmo-Chr18:9552702 0 dispersed
Cmo01g01236 Cmo-Chr1:9898036 Cmo09g00885 Cmo-Chr9:4595995 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00885 K10357 - csv:101210624 1884.77