Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00910 ATGGATTCTCACCAGCTGTTTGGATTTGGGGTTAATAGTGCAGAATTTTCATATACATCTTCTTATTCCTCTGTTCCATCTTTACCTAATAGTTTGCTTGGACCTGTGAACTTCAACTTAAGAAATTCTCCTGTGTCGTCGTCGCTATTTTCGTCGCAATTCGAATCGGATTCCTTTACGACGACGACTGTAAGTGATAGCCAGGATCAAAGGAATTCCCCGGATGATCTCTCGGGACTTAGCCCTTCGTGTAATTCGTCGTTTGAAACGAGTAGCTTTAATCGAATAGCTTCGTCGTATTTGGGATCAAATGCATTTGTTTATGAGGGTTGTTCTACTGAGGATATAAGCTATGCTTTGAAACAATTGGAGAGTGCTTTGATGGAACCTGATAATGAGGAAGTTGTGAACAAGCCTGATGAGAGTAGCAGGCCACAGATGATGGGGCAGAGACCATACTCGTGGAGCCAAGATCGATGTGGTGGGTCGTCGTATGTTGTTCAGTCTCAGACGTCGCCTGTGTCGAGAAGCCAGCGTTCTGAAGAAGTTCGATTGGGGAAACGCCAGAAATCGATGGATGAACCAATGTTGCAGCAGGATGGATTGCCATCGGATAATCTTAAGGAGTTGCTGATTGCTTGTGCAAAAGCTTTAGCTGAGTACAGGATGGAGGATTTCGACAAATTGGTTACTGCAGCACGAGGTGCTGTGTCTATTGGCGGTGAACCGATCCAACGTCTCGGCGCTTACATGGTCGAAGGACTGGTGGCAAGGAAAGAGGACTCGGGGGCGAATATATACCGTGCTCTAAACTGTAGAGAGCCTGCAAGTGATGATTTGCTTTCTTATATGCATATGCTATATGAAATCTGCCCCTACTTGAAGTTCGGTTACATGGCAGCAAACGGGGCGATCGCCGAAGCCTGTCGAAACGAAGATCGCATTCACATTATAGACTTCCAGATTAGTCAAGGGACACAATGGTTAACTCTTCTTCAAGCACTTGCAGCTAGACCGAGTGGAGCTCCACATGTGAGGATAACTGGTATCGACGACCCTGTTTCTAAATATGCTCGTGGTGATGGGTTGGAGGTCGTAGAGAGTAGGTTAGCCGAGATCTCGAGAAAGTACGGAATAAAGGTAGAGTTTCATGGAATACCTGTTTTCGCTCCAAACATCACGCGTGATATGCTCGACATCAGACCGGGGGAGGCTCTAGCTGTAAACTTCCCGTTGCAGCTTCATCATACCCCGGACGAAAGCGTCGACGTGAACAATCCACGCGACGGGCTGCTAAGGCTGGTGAAGTCATTATCCCCAAAGGTTGTAACTTTGGTAGAGCAAGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTGTGGAAACATTAGATTACTACTTAGCAATCTTTGAGTCCATTGATGTCACTCTACCAAGAGACAACAAGAAGCGTATCAACGTCGAGCAGCATTGTTTAGCAAAAGATATCGTTAACGTCATTGCTTGCGAGGGGAGGGAACGAGAAGAGCGACACGAGCTCTTCGGTAAGTGGAAATCAAGGTTGACAATGGCAGGGTTTCGCCAGTTCCCGTTGAGCTCTTATGTCAACTCCGTCATTAGAAGTCTTCTCAGGTGTTATTCGGAGCATTACACGCTCGTCGAAAAGGATGGAGCGATGCTGTTGGGATGGAGAAACAGGAACCTGATATCGGCCTCGGCATGGAATTGA 1734 46.6 MDSHQLFGFGVNSAEFSYTSSYSSVPSLPNSLLGPVNFNLRNSPVSSSLFSSQFESDSFTTTTVSDSQDQRNSPDDLSGLSPSCNSSFETSSFNRIASSYLGSNAFVYEGCSTEDISYALKQLESALMEPDNEEVVNKPDESSRPQMMGQRPYSWSQDRCGGSSYVVQSQTSPVSRSQRSEEVRLGKRQKSMDEPMLQQDGLPSDNLKELLIACAKALAEYRMEDFDKLVTAARGAVSIGGEPIQRLGAYMVEGLVARKEDSGANIYRALNCREPASDDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQISQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEVVESRLAEISRKYGIKVEFHGIPVFAPNITRDMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRLVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRDNKKRINVEQHCLAKDIVNVIACEGREREERHELFGKWKSRLTMAGFRQFPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWRNRNLISASAWN 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4762310 4764043 - CmoCh09G009100.1 Cmo09g00910 388912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00910 577 MobiDBLite consensus disorder prediction 143 179 - -
Cmo09g00910 577 MobiDBLite consensus disorder prediction 61 82 - -
Cmo09g00910 577 ProSiteProfiles GRAS family profile. 198 577 IPR005202 -
Cmo09g00910 577 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 20 577 - -
Cmo09g00910 577 MobiDBLite consensus disorder prediction 180 194 - -
Cmo09g00910 577 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 577 IPR005202 -
Cmo09g00910 577 MobiDBLite consensus disorder prediction 130 202 - -
Cmo09g00910 577 Pfam GRAS domain family 207 576 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01214 Cmo09g00910 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00910 Cmo-Chr9:4762310 Cmo16g00983 Cmo-Chr16:6731154 2.94E-172 dispersed
Cmo01g01214 Cmo-Chr1:9797559 Cmo09g00910 Cmo-Chr9:4762310 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10382 PF03514 GRAS 1.50E-126 CL0063 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00910 - - csv:101216606 960.674