Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00914 ATGCCAAAAGTTTGGTTCTCTCTGAAAAAGTCCTTCCCCTGCAAACCAGAGCCATCAGAAGTGTATGATCCTAAGTGCAGGAAACAACTCAACACAATCACAACAAAGAAAGCAGCCAAAAAGACAGGCTGTTCTTCAGGAAGGTCTGGCTGTTCAAGGTCCATAGCAAATCTCAAAGACGTCATCCATGGAAGCAAGAGGCACATCGAAAACCCGCCAATTTGCAGCCCGAGGTCGATCGGTAGCAGCGAGTTCCTCAACCCGATTGCTCATGAAGTAATACTAAGCAACTCAAAGTGTGAGCTCAAGATCACTGGTTTTGGAAGCTTCCACCAAGAGGGTGGGGGAAATTCTGATCTTAGCAGGGGTGGAGGCGGGAATTCGCCATTTTTCGGTACACTAAGGCCCGGAACTCCCGGTCCGGGGTCCAACTCCCCTTCTAGTACTACCTCCATATCTGCAACAAGAAAGCTTCCTTCTCTTTTGTCCTATAGAGATGGGAGTACTGCTAAATCCAAGGGAGGTGGGGAAGTTCGTACGAGCAAACGGTTCATGCCGCTAACTGAATCGAACGGTAGGACGTTTTCGATGGTTACTTGCCATAAATGTGGAGAGCAGTTCTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCCAAGCATGCCGATATCCTTACTGATAATGTTTCTATTGGTTTACCAAAATGGCTACTCGTCTTCGAGTTCAGACATTCATGGAGTTTCACGTTTCTTTCTGTTCTTTTTTTCTCAGTTACCGAGCTTGTGGAGGGCGATTCATCAAGGAAGATTGTCGAAATAATATGTCGAACAAACTTGTCGAAGTCGGAGAACAACAATAACCGAATCGAACGAGTTTTCAAAGTTCACAATATGCAAAAAGCATTGGCAGGATTTGAAGAACACAGGGAAATGGTGAAGATCAAGGCAAGCAAGCTTTCAAAGAAACACCCTCGATGCCTCGCGGATGGGAACGAGCTGCTGAGGTTTTACGGGACGATGTTAGCCTGCACTCTTGGACTAAACGGCTCGTCCACCCTCTGCATATCACAGAAATGCAGTGTCTGCAGAATTATAAGGAATGGTTTCTCAGCAGAGAAGGATATGAAAGAAGAAGTGGGAGTTTTCACGACTTCAACGAGCAGGAAAGCTTACGAAACCATTGAAACAACCGAAGAAACCTCGGTGAAGAAAGCATTGATAATCTGCAGAGTGATTGCAGGGAGGGTTCATAGGCCATTGGAGAACATCAAAGATATGGTTGGCCAAGCAGGGTTTGACTCCTTGGCTGGCAAAGTGGGCTTACATTCCACCATTGAAGAGCTTTACTTGCTCAATCCTAAAGCTTTGCTTCCTTGTTTTGTTGTGATTTGCAAACCATGA 1401 45.9 MPKVWFSLKKSFPCKPEPSEVYDPKCRKQLNTITTKKAAKKTGCSSGRSGCSRSIANLKDVIHGSKRHIENPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGSFHQEGGGNSDLSRGGGGNSPFFGTLRPGTPGPGSNSPSSTTSISATRKLPSLLSYRDGSTAKSKGGGEVRTSKRFMPLTESNGRTFSMVTCHKCGEQFCKLEAAESHHLSKHADILTDNVSIGLPKWLLVFEFRHSWSFTFLSVLFFSVTELVEGDSSRKIVEIICRTNLSKSENNNNRIERVFKVHNMQKALAGFEEHREMVKIKASKLSKKHPRCLADGNELLRFYGTMLACTLGLNGSSTLCISQKCSVCRIIRNGFSAEKDMKEEVGVFTTSTSRKAYETIETTEETSVKKALIICRVIAGRVHRPLENIKDMVGQAGFDSLAGKVGLHSTIEELYLLNPKALLPCFVVICKP 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4781899 4783463 - CmoCh09G009140.1 Cmo09g00914 388916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00914 466 MobiDBLite consensus disorder prediction 114 152 - -
Cmo09g00914 466 ProSitePatterns Zinc finger C2H2 type domain signature. 200 221 IPR013087 -
Cmo09g00914 466 PANTHER OS01G0785900 PROTEIN 3 466 - -
Cmo09g00914 466 SUPERFAMILY ADP-ribosylation 258 465 - -
Cmo09g00914 466 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 466 - -
Cmo09g00914 466 Gene3D - 263 465 - -
Cmo09g00914 466 MobiDBLite consensus disorder prediction 138 152 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01211 Cmo09g00914 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00914 Cmo-Chr9:4781899 Cmo16g00873 Cmo-Chr16:4681672 5.98E-177 dispersed
Cmo01g01211 Cmo-Chr1:9781096 Cmo09g00914 Cmo-Chr9:4781899 0 wgd
Cmo03g00531 Cmo-Chr3:5429382 Cmo09g00914 Cmo-Chr9:4781899 1.39E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00914 - - csv:101213316 696.427