Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00918 ATGACATTTCCACAACTTATGGGTGTTGCAAAAAGGAGATGTTTGGTTGTTCTGGTGATTCTTGTCTGTGTTTCTTTAGCAACTTGCTTGAAGGATCACGAGGAAGAGGAGCTGATTCTGAGTCAACTAGCTGACCCAATTACTGGGGATATCGACACAGAGATGGTGAGCAATTATGCTTATGATATGAATGAGACTAGTATCTTTTTATGTTCTTTAGAACAACAAATTTTAGTTCGTATTTCAGCTTCATCTGTCTTAAACCTTTTTGCCTTGCTTAAAGTATATGATCTTGCAACTCTTGAATTGCAGCAATTATGTTTAGTTTTGGAGATAATTGATCTTAGGTTTGTTCTTCACCATTGGCTTAAGATCTGCACACATCCTAAGCTGAGGTTTACTTATTTTAAATTCAAAACATTGCTGCAGGCTGAGCTGTTACTGTTTAAATGCAACTTGGATTTGCTTCAGTTAAAGGAAGCTGCAGATGGTACTGAATTGTGCTTTGAAGAAAGACCCGAAAGCACAAATGGTATTAATTTTGAATGTCAGGTGCTGACGAAAGGAAAAACGAACAGAATGCTAAGCGCCATGCATCCCCAGATGAAGCAAACTCTTTTAGATTGTTTAAGAAAGAATTTTCACGTCTCTGGAAACGACTACAATTCTAAGGCTTGGTACACCACATACCTGGAGTCATTGATTTTGATGCCTGGTAGTTTTAGAAGGAAGTTAAGTTCGAGATGGCATCGAAGTGCTAAAGAAGTGTCGAAATCTTCAGATCTCGAACATCCTTCAATAAAACTTTCTAGCACAAGTAGTCAAAAAGAAAAGAAATCTGATCATCAACAAACAATTATCATTGCTGTTGTTGTAACAGCAACAGTGACTTTTATTATTGTAGCTCTGCTCTTTATATGCTATAATAGTATTAGCTCCAGAATGAAGCAAAATGATGAAAATCATGCAAGGCCTCTCCTAAGCTTGAGCATAAATTCTTCACCAAATTTTTCTGCCTTCGGGAATTCTTTTAAGGAAGACAAGTTCATGAATCAAGCATCTAGCTTGAGTCAACACCAGAGAGCTCCATCTTTGGATGGTAGCCTGCAGCTTGTCTCTGATGGTGCACGTATTTCGATGCAGGGGCCTCCATCTTTTGAAGCTGCTGGAATTGTCAATAATTCATCTTTTGGATCAGTGAATTTGGCTGGGAGTTCTAATAATTTGCTGCCACCTCCTCCTGGAGCAGTGCCAGTCACCTCAGAGATTATGCCTCCTCTGAAGCCTCCTCCTGGCAGGGCTGTTCCCCTGCCTCCTGAACGCCCTAAGTCTTTTAAGCCTCCATCCAGCATGGCTACTCCTCCTCCGCCTCCACCACCAGAACTTCCTGGAGATTCAGGTCTTCCTCCTGTACCTCCTGGAAGTTCAGGTCTTCCTCCTGTACCTCCTGGAAGTTCAGGTCTTCCTCCTGTACCTCCTGGAAGTTCAGGTCTCCCTCCTGTACCTCCTGGAAATTCAGCTGTCCCTCCTGTACCTCCTGGCAATTCAGCTGTCCCTCCTGTACCTCCTGGAAATTCAGGTCGCCCTTCTGGACCTCCTCCACCTCCACCACCTGGAGCCAACAGGGCAGGCCCTCGCCCACCACCACCTCCCGGAAGTGGTAATGCTCCTCGGCCACCGCCATTTGCACCCAAAGGTGGAAATGCACCTCGACCTCCAAGGGGTTCTGCTTTAGGTGGTGATAATGGTATGGAAGATTCGGGTGTCCCCAAAGCCAAATTGAAACCGTTTTTCTGGGACAAAGTTCTTGCAAACCCAGATAATACCATGGTCTGGCATCAGATAAAAGCAGGGTCTTTCCAATTCAACGAGGAGATGATAGAAACTCTTTTTGGATATGCACCAGCAGATAAAAACAAAACTGATGGTAAGAAGGAATCATCATCAAAAGATCCTGTACAGCAGTTCATTCAGATCATTGATGCAAAGAAAGCGCAAAATCTGTCCATTCTTTTACGAGCACTGAATGTGACAAGAGAAGAAGTTTGTGATGCACTTCATGAAGGAACTGGTCTTCCTGCTGAACTTCTTGAGAACTTACTGAGGATGGCACCAACACCAGAAGAAGAACTCAAGCTTAGACTGTTCAGTGGGGAGACTTCTCAACTCGGAAATGCCGAGCGGTTCCTTAAAACGATAGTCGATATCCCATTTGCTTTCAAAAGGATGGAATCTCTGCTATTCATGAGCACTATTCAGGAGGACATCGCCATCACTAAAGAGTCCTTTGCTAACCTGGAGGCCGATATTGGTACCGAACGAGTTTGTTTCTCCTCCATCCCTGAACTTCCTAACTTTGGATTGGTCGCTTGCAAGGAACTTAAGAGCAGCAGGCTGTTCCTCAAACTGCTAGAAGCTGTTCTTAAGACGGGTAATCGGATGAACGATGGAACTTTTCGAGGTGGGGCGCAAGCATTCAAATTGGACACTCTCTTAAAATTGTCAGATGTGAAAGGAAAAGATGGGAAGACTACACTATTGCACTTTGTAGTTCAGGAGATAATCCGCACAGAAGGGATAAGAGCTGCCAGGAATGCCACTGGAAGCCAAAGCTTCTCAAGCACCTCATCAAAGGAGATGCTGGATGGAACTACTCACGATCCAGACGAGCATTTCCGTAACTTGGGTCTTGAGGTCGTGTCGGGGTTGAGCGGCGAACTTCAGAATGTGAAGAAAGCAGCGACCATAGATGCCGATGCCTTGACTGGTACCGTTTCTAAACTTGGGCATGGACTGTTGAGTTCAAGAGACTTTTTGAACAAAGACATGGAGAATCTAGGTGAAGAGAGTAGATTTCATCAGACACTGAAAAGCTTTGTGCAGAATGCTGAGGTTACTATCATGGCCCTCCTGGCAGAAGAAAAAAAGATCATGGAAATGGTGAAAAGCACGGGTGATTACTTCCATGGAAATGCTGGGAAGGATGAGGGCTTAAGGTTGTTTGTTATAGTGCGAGATTTCTTGATAATGATAGATAAGACATGCCGGGAGATAAAGGATGCACAGAAAAAACAGGCAAAGCAGGCGAAGGGGCACAGAAAGGCAGCATCTTCTTCTGATATCAATCCCTCCCTTCCGTCTTCCGATACCAATCAACCCCCGTCCTCATCTTCCGATACCAAACAACCCCCGTCCTCGTCTTCCGATACCAATCAACCCACGTCATCGTCTTCCGATACCAATCAACCCACGTCCTCGTCTCAAGACACCAATCAACCCACGTCGTCGTCCCCTGATACCAATCCATCCTCCTCGTCTCCTGATACCAATCAACCCCCGTCGTCGTCTCCAGATACCAATCAACCCCCTTCAGCTCCAGTTTCTGATCCACGCCACCCACCTCCTCCTCCTCCTCCACGCCACCCACCTCCTCCTCCTCCTCCACGCCACCCACCTCCTCCTCCACACCACTCACCTCCTCCTCCTCCTCCACGCCACCCACCTCCTCCCCCATCATCGTCTTCTGATACCAATCAACCCCCTTCAGCTCCAGTTTCTGGTCCACCCCACCCACCTCCTCCCCCATCATCGTCTTCTTATACCAACCAACCCCCTTCAGCTCCAATTTCTTATCCACGCCACCCACCTCCTCCCCCGTCATCGTCTTCTGATACCAATCAGCCCCCTTCAGCTCCAGTTTCTGATCCACGCCACCCACCTCCTCCCAATCTAAACCAGCTGATTTTCCCTGCAATTACTGATCGTCGGATGGGTAGCTCAAGTTCAAGTTCAGATGACGAAAGTCCATAG 3810 46.22 MTFPQLMGVAKRRCLVVLVILVCVSLATCLKDHEEEELILSQLADPITGDIDTEMVSNYAYDMNETSIFLCSLEQQILVRISASSVLNLFALLKVYDLATLELQQLCLVLEIIDLRFVLHHWLKICTHPKLRFTYFKFKTLLQAELLLFKCNLDLLQLKEAADGTELCFEERPESTNGINFECQVLTKGKTNRMLSAMHPQMKQTLLDCLRKNFHVSGNDYNSKAWYTTYLESLILMPGSFRRKLSSRWHRSAKEVSKSSDLEHPSIKLSSTSSQKEKKSDHQQTIIIAVVVTATVTFIIVALLFICYNSISSRMKQNDENHARPLLSLSINSSPNFSAFGNSFKEDKFMNQASSLSQHQRAPSLDGSLQLVSDGARISMQGPPSFEAAGIVNNSSFGSVNLAGSSNNLLPPPPGAVPVTSEIMPPLKPPPGRAVPLPPERPKSFKPPSSMATPPPPPPPELPGDSGLPPVPPGSSGLPPVPPGSSGLPPVPPGSSGLPPVPPGNSAVPPVPPGNSAVPPVPPGNSGRPSGPPPPPPPGANRAGPRPPPPPGSGNAPRPPPFAPKGGNAPRPPRGSALGGDNGMEDSGVPKAKLKPFFWDKVLANPDNTMVWHQIKAGSFQFNEEMIETLFGYAPADKNKTDGKKESSSKDPVQQFIQIIDAKKAQNLSILLRALNVTREEVCDALHEGTGLPAELLENLLRMAPTPEEELKLRLFSGETSQLGNAERFLKTIVDIPFAFKRMESLLFMSTIQEDIAITKESFANLEADIGTERVCFSSIPELPNFGLVACKELKSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVQEIIRTEGIRAARNATGSQSFSSTSSKEMLDGTTHDPDEHFRNLGLEVVSGLSGELQNVKKAATIDADALTGTVSKLGHGLLSSRDFLNKDMENLGEESRFHQTLKSFVQNAEVTIMALLAEEKKIMEMVKSTGDYFHGNAGKDEGLRLFVIVRDFLIMIDKTCREIKDAQKKQAKQAKGHRKAASSSDINPSLPSSDTNQPPSSSSDTKQPPSSSSDTNQPTSSSSDTNQPTSSSQDTNQPTSSSPDTNPSSSSPDTNQPPSSSPDTNQPPSAPVSDPRHPPPPPPPRHPPPPPPPRHPPPPPHHSPPPPPPRHPPPPPSSSSDTNQPPSAPVSGPPHPPPPPSSSSYTNQPPSAPISYPRHPPPPPSSSSDTNQPPSAPVSDPRHPPPPNLNQLIFPAITDRRMGSSSSSSDDESP 1269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4786856 4792528 - CmoCh09G009180.1 Cmo09g00918 388920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 1208 1225 - -
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 1255 1269 - -
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 256 276 - -
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 866 881 - -
Cmo09g00918 1269 Gene3D Formin, FH2 domain 589 1042 IPR042201 -
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 413 589 - -
Cmo09g00918 1269 PANTHER FORMIN-RELATED 120 515 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cmo09g00918 1269 PANTHER FORMIN-LIKE PROTEIN 5 120 515 - -
Cmo09g00918 1269 PANTHER FORMIN-LIKE PROTEIN 5 500 1068 - -
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 1116 1201 - -
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 1022 1269 - -
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 1035 1115 - -
Cmo09g00918 1269 SUPERFAMILY Formin homology 2 domain (FH2 domain) 533 1029 - -
Cmo09g00918 1269 PANTHER FORMIN-RELATED 500 1068 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 1232 1246 - -
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 866 885 - -
Cmo09g00918 1269 SMART it6_source 584 1025 IPR015425 -
Cmo09g00918 1269 Pfam Formin Homology 2 Domain 790 1010 IPR015425 -
Cmo09g00918 1269 Pfam Formin Homology 2 Domain 590 768 IPR015425 -
Cmo09g00918 1269 ProSiteProfiles Formin homology-2 (FH2) domain profile. 584 1037 IPR015425 -
Cmo09g00918 1269 MobiDBLite consensus disorder prediction 413 568 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01208 Cmo09g00918 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00918 Cmo-Chr9:4786856 Cmo11g01174 Cmo-Chr11:6781255 5.93E-109 dispersed
Cmo01g01208 Cmo-Chr1:9769759 Cmo09g00918 Cmo-Chr9:4786856 4.54E-13 wgd
Cmo02g00150 Cmo-Chr2:734161 Cmo09g00918 Cmo-Chr9:4786856 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00918 - - csv:101213072 759.214