Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00935 ATGATCTGTGCTGTGAAACAATCATCTAGGGCTATCCATTGCTCCGATGGTGTTATTCGGAGCAAAATCTCTGTTCCTTCTAAACGATCCTTGTTTCTTCCTCCTCTTCCGATGCAAAAACCTCCAAAATCCGCTGTTTCTGTTCATAAGGCTGTTCATGTTTCTTCGCTTGAGAATTTCGGATCACTTCGGGTTCGTAAACCTAATCCGATCAAATGCGAAGCTTACGAGGCTGATCGATCGCAACCGATTGAATCGAGCATCGATTTGTCGCAGAATCAAGCCCGTTCCGAGGCGGCGAAGAAGTTGAAAATCGGATCATACTTCGCTCTTTGGTGGGCTTTGAACGTAGTTTTCAATATCTATAACAAGAAAGTGTTGAACGCTTACCCATATCCTTGGCTGACCTCGACTCTGTCGCTTGCCGCCGGATCTTTGATCATGTTGATATCATGGATGACAAGAATTGCCGAGGCGCCCAAAACTGATATCGAATTTTGGAAGTCTCTGCTACCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACTGTGAGTATGTCTAAGGTTGCGGTTTCATTCACTCACATAATCAAGAGTGGTGAACCTGCTTTTAGCGTATTGGTTTCGAGGTTTTTGTTGGGTGAGACGTTCCCGCTTCCTGTCTACTTGTCGCTCCTTCCGATCATTGGTGGGTGTGCTCTTGCTGCTGTGACCGAGCTCAACTTTAACATGACAGGTTTCATGGGTGCCATGATATCAAACTTGGCATTCGTATTCCGTAACATATTTTCGAAGAAGGGCATGAAGGGAAAATCTGTTAGCGGGATGAACTACTATGCGTGTTTATCGATTTTGTCTTTGTTACTTTTGACGCCATTTGCGTTTGCCGTGGAGGGACCGCAACTGTGGGCAGAGGGATGGAAAACAGCAATCTCTCAAATCGGACCTCATTTCGTTTGGTGGGTTGCAGCGCAAAGTATATTCTACCATCTCTATAACCAGGTGTCTTACATGTCCTTGGATGAGATATCTCCCTTGACGTTTAGCGTCGGAAACACCATGAAACGTATATCCGTCATAGTTTCTTCCATCATCATCTTCCGCACGCCCGTGCAGCCAGTCAACGCTCTCGGAGCAGCCATTGCAGTTCTCGGAACCTTCATATACTCGCAGGTGCGCCTTTGCTCCTAG 1197 46.28 MICAVKQSSRAIHCSDGVIRSKISVPSKRSLFLPPLPMQKPPKSAVSVHKAVHVSSLENFGSLRVRKPNPIKCEAYEADRSQPIESSIDLSQNQARSEAAKKLKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDIEFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLLLTPFAFAVEGPQLWAEGWKTAISQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQVRLCS 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4905641 4908352 + CmoCh09G009350.1 Cmo09g00935 388937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00935 398 Pfam Triose-phosphate Transporter family 103 392 IPR004853 -
Cmo09g00935 398 PANTHER SOLUTE CARRIER FAMILY 35 27 394 - -
Cmo09g00935 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
Cmo09g00935 398 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 27 394 - -
Cmo09g00935 398 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 103 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo09g00935 Cmo16g00906 CCT
Cmo09g00935 Cmo16g00906 ECH
Cmo01g01194 Cmo09g00935 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00292 Cmo-Chr7:1429581 Cmo09g00935 Cmo-Chr9:4905641 0 dispersed
Cmo09g00935 Cmo-Chr9:4905641 Cmo16g00906 Cmo-Chr16:5410802 0 dispersed
Cmo06g01183 Cmo-Chr6:9021392 Cmo09g00935 Cmo-Chr9:4905641 3.48E-101 transposed
Cmo01g01194 Cmo-Chr1:9681913 Cmo09g00935 Cmo-Chr9:4905641 0 wgd
Cmo03g00550 Cmo-Chr3:5496170 Cmo09g00935 Cmo-Chr9:4905641 1.24E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00935 K15283 - csv:101220046 687.182