Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00952 ATGTTGAGGTTGGTTATCGAGTTGAAGCACCACCCGGTTTTCGATAAAGCTCTTCTGTTCTTCGTCAAAGCTTTCAACACGACCGCTTTCGCTTTGTTTCTATGCCTTCTCGCTCTAGTCGGTGCATCGGTTGGAACGGTGGTCGGAGCTTTCAAAGGCCATGGCGTCGCCATAGGTGCTATAGCCGGTGCAGCCGCAGCCCTTCAGCTATTGAGCTGCCCCGAATCGGAATATAGATATTCCTTGTCGAAGGAAGCAATAATGGAGAGTCTAATGAATGGGAAGGGGTTGATGAACTGGGCAAGCAACTTCTCGGAGTATATGTACCGAGAGATGTCGGAGTTCGTCGACGTCGCCGGAGAAAGCAGTGTCGAAGGAATGTCAATGGAGAGTGTTCAAAACTTGCCTATTTGTGAATATCATCATAGCAAGATGAAGAACTCCATTTCTTGTCCCATTTGCTTAGAGGTATTGATAGAATATTATACTATGGAAGGTACGATTCTTAGAAGGGTTATTCCATCTGACAATAGTTGCCTCTTCAATGCTGTTGGGTATGTTATGGACCACGATAAGCACAAGGCCGCCGAGCTAAGACAGGTCATAGCTGCAACAGTAGCAAGTGATCCAACAAGGTATTGTGAAGCATTTCTTGGGAAGCCAAATGAGGAGTATTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGTGCAATTGAGCTTTCGATACTATCCGAGTATTATGGGCGTGAAATTGCAGCATACGATATCCAGACCAAACGATGTGATTTGTACGGTCAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGATGGACTCCACTATGATGCTTTAGTTATGTCTCCATCTGAGGGAGCTCCAGAGGAATTTGATCAGACCATATTTTCTGTGAATCGGGACAGGACAATTGGTCCCATTGAAGGGCAAGCTCTTCATTTTGTTGAAGAACAGCAAAGGAAACGGAGATTCACCGACACTGCCAACTTCACGCTGCGATGTGGGGTTTGCCAAATCGGAGTCATCGGCCAAACGGAGGCTGTAGAACACGCAAAAGCCACTGGCCATGTCAACTTCCAAGAGTATAGATGA 1116 45.97 MLRLVIELKHHPVFDKALLFFVKAFNTTAFALFLCLLALVGASVGTVVGAFKGHGVAIGAIAGAAAALQLLSCPESEYRYSLSKEAIMESLMNGKGLMNWASNFSEYMYREMSEFVDVAGESSVEGMSMESVQNLPICEYHHSKMKNSISCPICLEVLIEYYTMEGTILRRVIPSDNSCLFNAVGYVMDHDKHKAAELRQVIAATVASDPTRYCEAFLGKPNEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTKRCDLYGQEKKYSERVLLIYDGLHYDALVMSPSEGAPEEFDQTIFSVNRDRTIGPIEGQALHFVEEQQRKRRFTDTANFTLRCGVCQIGVIGQTEAVEHAKATGHVNFQEYR 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5002570 5009449 - CmoCh09G009520.1 Cmo09g00952 388954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00952 371 PANTHER UBIQUITIN THIOESTERASE OTU1 133 369 - -
Cmo09g00952 371 Pfam OTU-like cysteine protease 175 265 IPR003323 -
Cmo09g00952 371 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 133 369 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Cmo09g00952 371 ProSiteProfiles OTU domain profile. 168 290 IPR003323 -
Cmo09g00952 371 Gene3D - 157 336 - -
Cmo09g00952 371 SUPERFAMILY Cysteine proteinases 156 288 IPR038765 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01181 Cmo09g00952 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01181 Cmo-Chr1:9611098 Cmo09g00952 Cmo-Chr9:5002570 1.06E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00952 K13719 - csv:101222942 399.823