Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo09g00962 | ATGGTCTGGACGAGAGGCCCTGCCGTCGGCCGCGGCTCATCTGCCACCGTCTATTTGGCCACAGACGCCTCCTCCGGCCACCACTTCGCCGTCAAGTCCACCGACCTCTCTTCATCAGCGTTGTTGCAGAAGGAACACGCTCTTCTCTCCAAATTGAGCTCTCCATACCTTATCAACTGCCTAGGTTTCGACATTGAAACCGAAACCTTCAAGATTCCGGTGTTCAATCTGTTCATGGAGTATTTTCCGGAGGGGACGCTGTGGGATGCGATTCAGAGCAGCGGCGGCCGGATGGAGGAATCGGCGATCCGAGTGTTTTCGCGCCAGATTTTGAAAGGACTGGAGTACCTTCATGCTAATGGATTGGCGCATTGCGATATTAAGAGCCGGAATCTGTTACTGAGCGATGCAGGTTTAAAAATCGCCGATCTAGGTTGTGCGAAATTTGTGGATGGAGTTTCCGAAAATGGAGTTAGGGATTTTTCTGGTTCGCCGGCGTTTATGGCGCCGGAGGTTGCGAGAGGTGAAGAACAGGGGTTTCCAGCGGATATTTGGGCTTTTGGATGTACAGTCATTGAAATGGCTACTGGCGAACATCCGTGGGCGGATATAAAAGATCCGGTGTCGGCGTTGTATCGGATTGGATTTACCGGCGAGTTGCCGGAGGCTCCACGGTGGTTATCGGAGTGGGCGAGGGACTTTGTCGCTAAGTGTTTGATAAAAGTCCCGAAAGAAAGATGGACTGCGAAACAGCTTCTTGAGCATCCGTTTCTTCAGGAATTTGATTCCGAGTCGGAAATTGAATCTTCGAGGATGAAAACGGTGAATTCTTCTCCGAGGTGTGTTTTGGATCAAAGCTTTTGGGATTCAATGGAAGATTCAAAGACTCCATTGAAGGTAACGCATCAAGCTTCGTTGGAGGATTGTCCGGCTGAGAGGATTAGAAGTTTGGCTGGTAATTTGTCGTCCGATTGGGACTTGGAAGGGGACGATGGAGATTGGATTTTGATCAGAAACAATGGCGTCGGCGGTGGAAGCCATGGAAATGGATCTGTGAGCTCAGATTTTTCAGCTACAGTTGAAGAAGAAGAAGAGCTGGAAATTTTGAACTTGGAATTTGAAGAAAATTCTGTATTGTTCTGTTCATATGATGATGATTCTGGTATTATGAACAATGGGAGAGGAGGATTAGAAATGGAAATTGGGAGATTTGGAGATCTTCATCTTCTGTTGTTTCATTGCCTCAAAGATTCATGGTTTTGA | 1263 | 47.82 | MVWTRGPAVGRGSSATVYLATDASSGHHFAVKSTDLSSSALLQKEHALLSKLSSPYLINCLGFDIETETFKIPVFNLFMEYFPEGTLWDAIQSSGGRMEESAIRVFSRQILKGLEYLHANGLAHCDIKSRNLLLSDAGLKIADLGCAKFVDGVSENGVRDFSGSPAFMAPEVARGEEQGFPADIWAFGCTVIEMATGEHPWADIKDPVSALYRIGFTGELPEAPRWLSEWARDFVAKCLIKVPKERWTAKQLLEHPFLQEFDSESEIESSRMKTVNSSPRCVLDQSFWDSMEDSKTPLKVTHQASLEDCPAERIRSLAGNLSSDWDLEGDDGDWILIRNNGVGGGSHGNGSVSSDFSATVEEEEELEILNLEFEENSVLFCSYDDDSGIMNNGRGGLEMEIGRFGDLHLLLFHCLKDSWF | 420 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5072083 | 5073399 | - | CmoCh09G009620.1 | Cmo09g00962 | 388964 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo09g00962 | 420 | ProSiteProfiles | Protein kinase domain profile. | 3 | 258 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo09g00962 | 420 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 122 | 134 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo09g00962 | 420 | CDD | STKc_MAPKKK | 3 | 258 | - | - | |
Cmo09g00962 | 420 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 1 | 352 | - | - | |
Cmo09g00962 | 420 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 302 | IPR011009 | - | |
Cmo09g00962 | 420 | Gene3D | Transferase(Phosphotransferase) domain 1 | 3 | 317 | - | - | |
Cmo09g00962 | 420 | SMART | serkin_6 | 3 | 258 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo09g00962 | 420 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 32 | IPR017441 | GO:0005524 | |
Cmo09g00962 | 420 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 | 1 | 352 | - | - | |
Cmo09g00962 | 420 | Pfam | Protein kinase domain | 7 | 258 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo09g00962 | Cmo-Chr9:5072083 | Cmo11g01890 | Cmo-Chr11:13141047 | 3.41E-103 | dispersed | |
Cmo01g01167 | Cmo-Chr1:9545207 | Cmo09g00962 | Cmo-Chr9:5072083 | 0 | wgd | |
Cmo02g00180 | Cmo-Chr2:852639 | Cmo09g00962 | Cmo-Chr9:5072083 | 2.84E-102 | wgd | |
Cmo03g00571 | Cmo-Chr3:5572843 | Cmo09g00962 | Cmo-Chr9:5072083 | 1.09E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74582 | PF00069 | Pkinase | 2.40E-53 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo09g00962 | K20716 | - | bhj:120084748 | 636.336 |