Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00981 ATGAGTTGCTGGAAGAAATTTCCGGCGATGTGTTCTTCTTCTCGTACTTTTCTTCTTCTGTTTCCTCTGTTTCTTCACTCGTTCGTCGCGCTGGTATCTGCTCAGGGATCTAATAACACTTCTCCATGGCAGACTTTGAGTGGAGATCCTCCATTTGTTGTGGCTCGTGGTGGGTTTTCAGGGTTGTTTCCTGATTCGAGTGGATTTGCTTATAGTTTTGCAGTTATGGTTAGTGTTCCTGATGTGATCTTATGGTGCGATGTGCAATTAACTAAAGATGGAGTTGGAATTTGTCTCCCCGATCTGAGTTTTAACAATGCTACTGACGCTAAGGGGATTTTGGGGGAAAACCGCAGCAGTGTGTATCTTGTTAATGGAGTAGCTACTAAGGGATTGTTTACGGTCGATTTCAATGCGGAAGAACTGGCAAATGTTTCTCTTACTCAAGGTATCTTTTCTCGGACGAACAAGTTTGATGGCAATCGGTTTGTTATTCTCACTCCTGAAGATGTGGTTAACCAGTTCAAGCCACCAGGATTTTGGCTGAATGTTCAGCATGATGCATTCTTCACACAACGAAACTTGAGCATGAGGAACTTTGTACTTTCTGTATCCAGACGCATCATTGTTAACTACATATCATCACCAGAGGTGGGATTTCTTAGAAGCATAGCATCGAGATTTAATCCCCGCACAACGAAGTTGATCCTTCGGGTTTTACAACCAACTGATATTGAGATTACCACCAATCAGACATATCAATCTCTCTTACGCAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCTAAGACTTATATAGTGCCCATTAAGGATGGTTACATACAATCTGAAACCTCTCTCGTTTCTGACGCTCATAAAGCAAATCTGGAAATTTTTGCATCAGAGTTCTATAGTGACCTTCCACTAAGCTTCAACTACAGTTATGATCCTGTTACTGAATACCTGTCTTACATTGACAACGGTAAATTTTCAGTTGATGGTGTGCTCACTGATTTCCCTATCAGTCCATCGTCAGCTATTGACTGTTTTGCTCATTTGGACAAGAATGCCAAAAGTCAAGCCAAACCTTTGGTTATTTCAAAATTTGGAGCTAGTGGAGACTTTCCTGGTTGCACAAATTTGGCGTATTCCAAGGCTATTTCTGATGGCGTTGATGTGCTTGACTGTCCAGTTCAAATGTCAAAAGACGGAATACCATTTTGCATGAGCTCAATTAATCTCATCGAGAGCACAACAATATCTCAAACATCATTCACTACTCTTTCTAAAAAAGTTCCTGAAATTAGTCCTAACGATGGAATCTTTGCTTTTGACTTAACATGGGAAGAGATTCACGGCCTGACCCCGTCAATATTGAGCCCTTCATCGAAGTTCACGTTGTTCCGAAACCCAAAGTTCCGAAACAAGGGGGAATTCTTAACGCTACCTGATTTCTTGGACTTGGCAAAGAATTCCAGCACTCTTTCTGGTGTCTTGATCCACATTGAGAATGCAGCCTACCTTGCTAAGGAGCAGGGTTTAGGTGTAATTGATGCGGTCATTGATTCCTTGAGCAAAGCTGGTTATGATAATCAGACAGCACAGAAAGTATTGATTCAATCTCCAAATAGCCCTGTTCTAATCAAATTTAAACAGGAAAAGAAAGAATACGAGCTTGTTTACAAAGTCGACGAGTCGATTAGTGATGTGCTCAATTCTACTGTTGTGGACATTAAGAGTTTTGCCAACTCTGTGACTGTCAGCAAGACCTCTGTCTTACCTGTAAATCAGCAATTTCTCATTGGACCTACAGATGTTGTGACGAAGCTGCAATCACTTAATATCTCTGTATATGTGGAAACCTTCAGCAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCAGATGCAACAGTAGAGATCAACTCATTTGTTATGGGATCCGGCATTGATGGAGTCATCACCGACTTTCCAAAGACATCTGCTAGATATAAAAAGAACCGTTGTTTAACAACGAAAGAAGCACCAAATTACATGAGCCCTGTCCAGCCTGGTAGCTTGATGCAGCTTATTACTGCAGACTACCTGCCTCCAAAGGAACGTCCAAGCCCGATTCTAGACGACAATGACGTAGCCGAGCCACCATTGCCTCCGGTTTCGAAGAAAGCCCCAGGACCTGCTGTGGATGATGGCTCTACAGCAACACCTCCAACATCTAAACCCAATGGACAACCCAAGCTTGGAGCTGGAACAGGCTTCTTGCTCTTGAACCTTGCCATACTCTGCCTTTCTCTTCTTCCATTCTGA 2319 42.22 MSCWKKFPAMCSSSRTFLLLFPLFLHSFVALVSAQGSNNTSPWQTLSGDPPFVVARGGFSGLFPDSSGFAYSFAVMVSVPDVILWCDVQLTKDGVGICLPDLSFNNATDAKGILGENRSSVYLVNGVATKGLFTVDFNAEELANVSLTQGIFSRTNKFDGNRFVILTPEDVVNQFKPPGFWLNVQHDAFFTQRNLSMRNFVLSVSRRIIVNYISSPEVGFLRSIASRFNPRTTKLILRVLQPTDIEITTNQTYQSLLRNLTFIKTFASGILVPKTYIVPIKDGYIQSETSLVSDAHKANLEIFASEFYSDLPLSFNYSYDPVTEYLSYIDNGKFSVDGVLTDFPISPSSAIDCFAHLDKNAKSQAKPLVISKFGASGDFPGCTNLAYSKAISDGVDVLDCPVQMSKDGIPFCMSSINLIESTTISQTSFTTLSKKVPEISPNDGIFAFDLTWEEIHGLTPSILSPSSKFTLFRNPKFRNKGEFLTLPDFLDLAKNSSTLSGVLIHIENAAYLAKEQGLGVIDAVIDSLSKAGYDNQTAQKVLIQSPNSPVLIKFKQEKKEYELVYKVDESISDVLNSTVVDIKSFANSVTVSKTSVLPVNQQFLIGPTDVVTKLQSLNISVYVETFSNEFVSQAWDFFSDATVEINSFVMGSGIDGVITDFPKTSARYKKNRCLTTKEAPNYMSPVQPGSLMQLITADYLPPKERPSPILDDNDVAEPPLPPVSKKAPGPAVDDGSTATPPTSKPNGQPKLGAGTGFLLLNLAILCLSLLPF 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5199176 5206892 + CmoCh09G009810.1 Cmo09g00981 388983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00981 772 CDD GDPD_SHV3_repeat_2 367 668 - -
Cmo09g00981 772 ProSiteProfiles GP-PDE domain profile. 367 669 IPR030395 GO:0006629|GO:0008081
Cmo09g00981 772 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 24 750 - -
Cmo09g00981 772 MobiDBLite consensus disorder prediction 706 749 - -
Cmo09g00981 772 Gene3D Phosphatidylinositol (PI) phosphodiesterase 365 668 IPR017946 GO:0006629|GO:0008081
Cmo09g00981 772 Gene3D Phosphatidylinositol (PI) phosphodiesterase 50 347 IPR017946 GO:0006629|GO:0008081
Cmo09g00981 772 SUPERFAMILY PLC-like phosphodiesterases 366 668 IPR017946 GO:0006629|GO:0008081
Cmo09g00981 772 SUPERFAMILY PLC-like phosphodiesterases 50 345 IPR017946 GO:0006629|GO:0008081
Cmo09g00981 772 ProSiteProfiles GP-PDE domain profile. 51 351 IPR030395 GO:0006629|GO:0008081
Cmo09g00981 772 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 24 750 - -
Cmo09g00981 772 CDD GDPD_SHV3_repeat_1 51 350 - -
Cmo09g00981 772 Pfam Glycerophosphoryl diester phosphodiesterase family 374 664 IPR030395 GO:0006629|GO:0008081
Cmo09g00981 772 Pfam Glycerophosphoryl diester phosphodiesterase family 86 344 IPR030395 GO:0006629|GO:0008081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01146 Cmo09g00981 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00804 Cmo-Chr3:6521474 Cmo09g00981 Cmo-Chr9:5199176 0 dispersed
Cmo07g00504 Cmo-Chr7:2290184 Cmo09g00981 Cmo-Chr9:5199176 0 dispersed
Cmo13g01119 Cmo-Chr13:9127081 Cmo09g00981 Cmo-Chr9:5199176 6.43E-22 transposed
Cmo18g00005 Cmo-Chr18:13163 Cmo09g00981 Cmo-Chr9:5199176 1.02E-20 transposed
Cmo01g01146 Cmo-Chr1:9395372 Cmo09g00981 Cmo-Chr9:5199176 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00981 - - bhj:120086180 1271.14