Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g01001 ATGGCCCGCCATCTCCTCCTCCTCTCCATTTTCCTCCTCCTCCTCTCCTCCGCCGTCGCCCACAGCGGCCACCACGACGATGACGATGCCGGAGAGGTCGAGGCCACTCCAAATCTCCGCTCTAAGCCGCTCATTCTCGTTAAGATCGGCTGTCTTATTCTCATCTTTTTCGGTACTTTCATCCCTGGAATCTCTCCCTGTTTCTTCAAATGGAACGATGGATTCCTTGTCCTTGGTACTCAGTTTGCTGGCGGAGTCTTCTTTGGCACTGCTATGATGCATTTCCTCTCCGATGCTAATGAGACGTTTGGCGATTTGACTGATAAGGCGTATCCGTTCGCGTTTATGCTTGCTTGTGTAGGGTTTTTGATGACTATGGCGGCGGATTGTGTGATATCGTATCTCTATCGTAAACAGAACGGTGATTCTTCGATTGATGTTGAGCTTCGAGGAGCCGCAATTTCACCCTCAAAGCTTCAGGTCCATAATGGCAGCAATGGCCATAACCCACATCCACATGCAGCTATCACAACAATGGGTTCATTTGGGGACAGCATTTTACTAATCGTTGCGTTGTGCTTTCACTCCGTGTTCGAAGGCATTGCCATCGGCGTTGCAGAGACCGAAGCCGATGCCTGGAGAGCCCTATGGACAATCTCCCTCCACAAGGTTTTTGCAGCCATTGCCATGGGCATTGCTCTCCTCCGAATGATCCCAAACCGCCCCTTGTTGTCGAGCGCTGCCTATTCCTTTGCTTTCGCCATCTCGAGCCCCATTGGCATTGCTATCGGACTCATAATCGATGCCACGACAGAAGGCGCGGTTGCAGATTGGATCTTTGCCATCTCGATGGGGCTGGCTTGTGGAGTGTTCATTTATGTGTCCATAAACCATCTGCTTTCAAAGGGATACACACCCAAGGATTCAGTTGGGGTGGTCAATCCCAATCACAAGTTTGTTGCTGTGCTTTTAGGCATTGGGATTATTGCTGTTGTAATGATTTGGGACACCTGA 1014 50.2 MARHLLLLSIFLLLLSSAVAHSGHHDDDDAGEVEATPNLRSKPLILVKIGCLILIFFGTFIPGISPCFFKWNDGFLVLGTQFAGGVFFGTAMMHFLSDANETFGDLTDKAYPFAFMLACVGFLMTMAADCVISYLYRKQNGDSSIDVELRGAAISPSKLQVHNGSNGHNPHPHAAITTMGSFGDSILLIVALCFHSVFEGIAIGVAETEADAWRALWTISLHKVFAAIAMGIALLRMIPNRPLLSSAAYSFAFAISSPIGIAIGLIIDATTEGAVADWIFAISMGLACGVFIYVSINHLLSKGYTPKDSVGVVNPNHKFVAVLLGIGIIAVVMIWDT 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5321822 5324758 - CmoCh09G010010.1 Cmo09g01001 389003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g01001 337 Pfam ZIP Zinc transporter 46 332 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cmo09g01001 337 PANTHER ZINC TRANSPORTER 11 23 336 - -
Cmo09g01001 337 PANTHER ZINC/IRON TRANSPORTER 23 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g01001 Cmo-Chr9:5321822 Cmo09g00698 Cmo-Chr9:3446176 2.12E-14 dispersed
Cmo09g01001 Cmo-Chr9:5321822 Cmo18g00524 Cmo-Chr18:3822705 9.14E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g01001 K14709 - csv:101208105 559.681