Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g01060 ATGGCCACCACCGGAGACGCACGGCGGAATGAGTTTTCCATCTCCACGCTGCTGCTTCTCTCACTCTCCATCGTCGTCGTCGTCGTCTTCCTCCTCCCTGTTTCCTCCGCCGGCGAAACCTCCTCCTTCTTTAACCACCGCAAGATGTCCGCCGTTGGAACTTCTTCCAACTCTACCTACGCCGTCATCTTCGACGCCGGAAGCTCCGGCAGCCGCGTCCATGTCTTCCACTTCGACCGGAACCTGGATCTTCTCTTCATCGGTTCAGACATTGAGGTTTTCTCACAGATAAAGCCAGGGCTGAGTTCGTACGCTGATGATCCTCAGAAAGCCGCGGATTCTCTAATTCCTTTACTGGAGAAAGCAGAAATCGCAGTTCCTGAGAAACTTCAATCCGTGACGCCGATTCGCCTCGGAGCGACGGCAGGGCTTCGGTTCTTGGAAGGCGACAGATCTGAGAGGATTTTGGAAGCGGTCAGGAATCTTCTGAAAACGAAGAGCGGATTCATGTACGGAGCGGATTCGGTTTCGATTTTGGACGGAAATCAAGAAGGTTCTTATCAATGGTTGACAGTAAACTATTTGCTGGAGAATTTGGGGAAGAGATACTCTAATACGGTGGGAGTAATTGACCTTGGAGGTGGCTCTGTTCAAATGGCGTATGCAATCTCTGATGAAGATGCAGCCAAGGCGCCCATTTCTTCTGATGGCTACTCCAAATTTGTTCAGAAATTTTACCTCAAGGGCGCTAATTATTACCTCTACGTTCACAGTTATTTGCGTTACGGTTTACAAGCTGCCCGAGTTGAGATCTTGAAGGTGACCGAAGAGCTTGGCAACCCCTGCATTTTAGCTGGCTATCAAGGTACATACGCATACGGTGGAAAGGAGTACAAAGCATCGTCACCTCGATCGGGGTCGAGCTTTGCCCGTTGCCGGAGTGTAATTCTGGAGGCACTGAATATCAACAAATCATGTGGGTATAACGATTGCAGCTTTGATGGTGTATGGAGTGGCGGCGGAGGAGCCGGCGTGAAGAACCTCTATGTTGCTTCCTTTTTCTTTGACAAAGCAGCTCAGGCGGGTTTTATAGATTCCGACAAGCCAGACGCCATGGTGAAGCCCATTGATTTCAAGAGAGCTGCGAGGATTGCTTGTCAAACCAAGTTTGTTGATGCAAAGGCCAAATACCCTAATGTTTACTCGAGCGACTTGCAATTTGTGTGCATGGATCTCGTGTACGAGTACACGCTTCTTGTTGATGGCTTCGGCATTGATTCTCGGAAGAGTATCACATTGGTGAAGCAGGTAGCATATCATGGTTCTCTTGCAGAGGCGGCATGGCCATTGGGCAATGCTGTAGCCATCGCCTCATCCCCAAAGTACTCAACTGCAACTTATTGA 1404 49.64 MATTGDARRNEFSISTLLLLSLSIVVVVVFLLPVSSAGETSSFFNHRKMSAVGTSSNSTYAVIFDAGSSGSRVHVFHFDRNLDLLFIGSDIEVFSQIKPGLSSYADDPQKAADSLIPLLEKAEIAVPEKLQSVTPIRLGATAGLRFLEGDRSERILEAVRNLLKTKSGFMYGADSVSILDGNQEGSYQWLTVNYLLENLGKRYSNTVGVIDLGGGSVQMAYAISDEDAAKAPISSDGYSKFVQKFYLKGANYYLYVHSYLRYGLQAARVEILKVTEELGNPCILAGYQGTYAYGGKEYKASSPRSGSSFARCRSVILEALNINKSCGYNDCSFDGVWSGGGGAGVKNLYVASFFFDKAAQAGFIDSDKPDAMVKPIDFKRAARIACQTKFVDAKAKYPNVYSSDLQFVCMDLVYEYTLLVDGFGIDSRKSITLVKQVAYHGSLAEAAWPLGNAVAIASSPKYSTATY 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5758340 5764325 - CmoCh09G010600.1 Cmo09g01060 389062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g01060 467 Pfam GDA1/CD39 (nucleoside phosphatase) family 54 459 IPR000407 GO:0016787
Cmo09g01060 467 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 179 194 IPR000407 GO:0016787
Cmo09g01060 467 PANTHER APYRASE-LIKE PROTEIN 15 459 - -
Cmo09g01060 467 CDD NBD_sugar-kinase_HSP70_actin 62 221 - -
Cmo09g01060 467 Gene3D Exopolyphosphatase. Domain 2 180 438 - -
Cmo09g01060 467 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 15 459 IPR000407 GO:0016787
Cmo09g01060 467 Gene3D - 60 453 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00264 Cmo-Chr3:3926741 Cmo09g01060 Cmo-Chr9:5758340 1.09E-176 dispersed
Cmo05g00866 Cmo-Chr5:5657289 Cmo09g01060 Cmo-Chr9:5758340 2.79E-43 dispersed
Cmo09g01060 Cmo-Chr9:5758340 Cmo13g00908 Cmo-Chr13:8057496 5.54E-20 dispersed
Cmo09g01060 Cmo-Chr9:5758340 Cmo07g01222 Cmo-Chr7:6653630 1.45E-173 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g01060 K14641 - gmx:100787491 522.702