Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g01076 ATGGTACCTTCGGGGCCATCTACTCCCGTTGGTGGTGCGCAGTCTGTTCCACCGTCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGAACTCAGTTTAGCAGTATGAATATGCTTGGTAATACACCCAGTATGTCTTCTCTCCTTAATCAGTCATATGGGAATGGAATTCCAAATTCTGGGTCCTCAGGCCTTGGAAACAGCCAACGAGTAGGTATGGACCCTGCTACCGAGTCAGATCCATTTTCACTTGTTGGCAATGGTATGAACTTCAACAATACCCCGTCGTTGGTGGCATCAAATACACCAAACCCTGGTTCATCTAGTCCAGTTTCAGGGCAACAGTTTTCAAACCATCCTAGCAGCCAAATAATACCCAATCAACAGCAGCCACAGCAAATTGAACCCCAGAACTTCCAACATAGTCAGCACTCAATGCAACAGTTCGCTTCCTCTAATAACACACAGCAGTCACAGCAGCAACAACCACATCAATTCCAACCTATTCGGGGAAGCTTATGCGGTGTTGGACCTGTCAAGTTAGAGCCTCAAATGAATAATAATGATCTTCAAGGGCAGCAACTACAGCAGCAGCAGCAGTTGCAGTCGATGAGGAATCTTGGCACTGTGAAACTGGAACCGCAACAACTTCAAGCAATGAGAAACTTGGGTCCTGTGAAATTGGAACCTCAACAATCTGATCAGTCATTGTTTCTACAGCAGCAACATCAACAGCAACAACAACAGCAACAACAACAGTTACTCAGTATGTCTAGGCAGTCCTCTCAGGCTGCTACTGCTGCGCAGATTAGTCTTTTGCAACACCAAAGACTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTGCCCTTGAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCCCGACGTTTAACAAATTATATGTGCTCACAACAGAAGAGGCCTGAAGACAACAATATTGAGTTCTGGAGGGAATTTGTTGCAGATTTCTTTGCTCCCCATGCCAAAAAGAAATGGTGCGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCGCAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCGACTTTTGAAGTTCTCCCAAGGCTGTTCAAGATCAAGTATGAGAGTGGAACTCTTGAAGAGCTTCTCTATGTTGATATGCCCCGTGAATACCATAATGCATCTGGACAAATTGTCCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGCGATGGCCAACTTCGAATAGTTTTTTCTCCAGACTTGAAGATATGCTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTACTTATACCGCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCAATTCAAAATGCGTCATCTAACTTGTCTACTTCAGAGTTGCAAAATAACTGCAACATGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATATGTCCGATGCCTTCAGATATCGGAAGTCGTCAACAGTATGAAGGACTTGATAGATTACAGCCAAGAAACCATGACTGGGCCAATTGAGAGTTTGGCTAAGTTTCCACGGAAGACGAATGCTTCACCACGCTTCCACAGCCAAGCTCAGAACACCGAGCAACAATTACCTCAGCCTCAGCAAACAATTGATCAAAATGCAAACGGTGACCAAAGCTCGGTCCAGGCTGCTGCTATGCAGCTTGCTGCTAACAATGGCGTTCCAAGTGCAAATAACTCTGCTAATCCAACATCAACATCATCTCCTGCTAGTGCAATTGTTGGGTTACTCCACCAGAATTCCATGAACTCCAGACAGCAGAACTCTATGAATAGCACTGGCAGCCCTTACGCCGGGAATTCTGCGCAAATACCGTCCCCGGGTTCCTCCTCGGTTGCTCAGGCACAAGCAAACTCCTCATTCCAATCGCCTACATTGTCTTCACCTAACAATCACCCACAGTCATCAATTGGCACTGCAACCGCTACTAATCACATGAGTGCCACTAATTCTCCAGCAAATGTTCCCTTGCAACAGCAGCAGCCAACACACTCTTCTGAAGCTGATCAAAATGATTCCCAAAGCTCTGTACAAAAGATCATTCAGGAATACATGATGTCGAACCATCTAAACGGGATGAACACAATGACTGGCGTTTCCTCTCTAGGAGATGATGTGAAAACCGTTAACAGGATGTTGCCGGGAAACAACATTATGAGTCTCAATGGACGAAACGGTCTCATTGGAAGTGGAACTGCCAATGGGGTTTCTGGTATGAGGAGCACAGGATATGGCTCCATGGGCGCAGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGTCTGCAATGGGAAACAACTCTATTTCGAACGGGAGAATCGGGATGGCGTCATTGGCCCGAGAACAGAGCATAAATCATCAAGATTTTGGTGACCAGCTTCTTAATGGACTGGGAGCTGTGAATGGATTTAATAATCTTCAATTCGATTATTGA 2727 45.4 MVPSGPSTPVGGAQSVPPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNTPSMSSLLNQSYGNGIPNSGSSGLGNSQRVGMDPATESDPFSLVGNGMNFNNTPSLVASNTPNPGSSSPVSGQQFSNHPSSQIIPNQQQPQQIEPQNFQHSQHSMQQFASSNNTQQSQQQQPHQFQPIRGSLCGVGPVKLEPQMNNNDLQGQQLQQQQQLQSMRNLGTVKLEPQQLQAMRNLGPVKLEPQQSDQSLFLQQQHQQQQQQQQQQLLSMSRQSSQAATAAQISLLQHQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKPVYEPGMCARRLTNYMCSQQKRPEDNNIEFWREFVADFFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLSTSELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETMTGPIESLAKFPRKTNASPRFHSQAQNTEQQLPQPQQTIDQNANGDQSSVQAAAMQLAANNGVPSANNSANPTSTSSPASAIVGLLHQNSMNSRQQNSMNSTGSPYAGNSAQIPSPGSSSVAQAQANSSFQSPTLSSPNNHPQSSIGTATATNHMSATNSPANVPLQQQQPTHSSEADQNDSQSSVQKIIQEYMMSNHLNGMNTMTGVSSLGDDVKTVNRMLPGNNIMSLNGRNGLIGSGTANGVSGMRSTGYGSMGAGLAQASMVNGMKSAMGNNSISNGRIGMASLAREQSINHQDFGDQLLNGLGAVNGFNNLQFDY 908
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5826816 5836021 + CmoCh09G010760.1 Cmo09g01076 389078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g01076 908 MobiDBLite consensus disorder prediction 681 773 - -
Cmo09g01076 908 MobiDBLite consensus disorder prediction 605 638 - -
Cmo09g01076 908 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 908 - -
Cmo09g01076 908 Pfam LIM-domain binding protein 342 596 IPR029005 -
Cmo09g01076 908 MobiDBLite consensus disorder prediction 64 91 - -
Cmo09g01076 908 MobiDBLite consensus disorder prediction 1 42 - -
Cmo09g01076 908 MobiDBLite consensus disorder prediction 100 185 - -
Cmo09g01076 908 MobiDBLite consensus disorder prediction 64 203 - -
Cmo09g01076 908 MobiDBLite consensus disorder prediction 8 42 - -
Cmo09g01076 908 PANTHER LIM DOMAIN-BINDING PROTEIN 1 908 IPR029005 -
Cmo09g01076 908 MobiDBLite consensus disorder prediction 603 638 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g01076 Cmo-Chr9:5826816 Cmo15g00639 Cmo-Chr15:3096562 0 dispersed
Cmo01g01061 Cmo-Chr1:8524802 Cmo09g01076 Cmo-Chr9:5826816 0 wgd
Cmo04g02535 Cmo-Chr4:18611539 Cmo09g01076 Cmo-Chr9:5826816 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g01076 - - csv:101221714 1387.47