Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo09g01085 | ATGCTTGGTGACTCCACTACTTCCGTCTTGGGCGGTGGCGCCGCCGTGCCGGAGACGAATCATTGCCATGATGAGGTAATCGGCGACATGGGTGTAGCGGCGGCGGCGGTGGAGGAGATTAATAATAATTCTGGTGAAGAGGAGAGACGGAGAAGCGGAGGAGGAGGAGGAGGAGACGACGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACCTTAGCTCTCCTGAAAATTCGCTCCGATTTGGACGTGGCTTTTCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAGTTTCCAGGAAACTAGGGGAGCTTGGATATCATCGAAGTGCAAAGAAATGCAAAGAGAAATTTGAGAATGTTTACAAATACCATAAAAGAACAAGAGAAGTTCGTAGTGGGAAACCAGATAGCAAAACTTATAAATTTTTTGAACAATTAGAAGCTCTTGAGAATCACCCACCTTTTAATTTCAATCCACCGCCGCCACCTCCGCCGTCAACCACCGTCATTCCCACTGTTCCATCCACCACCACCACCACCCTACCCCACTTGATGAACATATCCTTCTCTCAACCAAATCCCACAATTCACCTCCCGTCTCCGCCCGCTCCGTTCAATAACCCTACCACCTCGTCCATTCCCGTGGGGTTTCTTGAAGCGGATCTTATCTCGAATTCAACATCGGATGATGTCGATGATTCATCGACATCATCCGATGAGGCACCGAGGAGGAGGACGAAGAAGAGGAAATGGAAGGAGTTTTTTGAGAGATTAATGAAGGAAGTGATTCAAAAACAAGTGGAAATGCAAAAGAGATTCTTGGAAGCTATTGAGAAAAGGGAACAAGAGAGAATTGTTAGAGAAGAAGCTTGGAGAATTCAAGAAATGGCTAAAATCAATAGAGAAAGAGAGATTTTAGCTCATGAAAGATCAATGGCGGCTGCTAAAGACGCCGCCATTACTTCGTTCCTCCAAAAAATAACCGAATCCCAACAGAACAACAACAACCACAACAACAACAATCTGTCACGAACGCCACTGCCACCGCCGCCACCACAACAACAACCAATACCCATGTCAAATCCGACACCGGTCGTACAACCGCCACCGCCACCAGCACCGCCATCTTCATCGACATTGCAAGTAGTTCTTCCACAAAAGATGGAGATTATGAAAATGGATCATAATGGTGGGGAGAATTACACTATGAGTCCATCTTCAAGCTCATCAAGATGGCCAAAAGTGGAAGTAGAAGCATTGATCAAATTAAGAACAAATCTTGAAGCTAAATATCAAGAGAATGTACCAAAAGGGCCATTATGGGAAGAGATATCATCAGCCATGAAGAGAATAGGTTACAATAGAAATGCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAGAAAGTGAAGGAAACAAGAAAAACAAGGCCAGAGGATTCCAAGACATGCCCTTATTTCCACCAGCTCGATGCATTGTATAGGGAAAAGAGCGGCGGAAACAACAACAACAACAATAACAGGAAGCTCGAGCTCGAAAACATCGATTCTTCGACGATGATTCCATTGATGGTTCAACCTGAACAACAATGGCCACCGCAGCAAGAGATCACCCGACCCGACTCGGGCAACGAAGAGATGGAGAGCGAACCGATGGATCGCGACGATAAAGACGATGATGACGACGATGATGAAGAGGAAGAGGACGAGGGTGGTGGGAACTATGAGATTGTGGCTAGCAAACCAACTTCGGTGAGTACTGGTGAGTGA | 1797 | 46.24 | MLGDSTTSVLGGGAAVPETNHCHDEVIGDMGVAAAAVEEINNNSGEEERRRSGGGGGGDDGDRSFGGNRWPRQETLALLKIRSDLDVAFRDASVKGPLWEQVSRKLGELGYHRSAKKCKEKFENVYKYHKRTREVRSGKPDSKTYKFFEQLEALENHPPFNFNPPPPPPPSTTVIPTVPSTTTTTLPHLMNISFSQPNPTIHLPSPPAPFNNPTTSSIPVGFLEADLISNSTSDDVDDSSTSSDEAPRRRTKKRKWKEFFERLMKEVIQKQVEMQKRFLEAIEKREQERIVREEAWRIQEMAKINREREILAHERSMAAAKDAAITSFLQKITESQQNNNNHNNNNLSRTPLPPPPPQQQPIPMSNPTPVVQPPPPPAPPSSSTLQVVLPQKMEIMKMDHNGGENYTMSPSSSSSRWPKVEVEALIKLRTNLEAKYQENVPKGPLWEEISSAMKRIGYNRNAKRCKEKWENINKYFKKVKETRKTRPEDSKTCPYFHQLDALYREKSGGNNNNNNNRKLELENIDSSTMIPLMVQPEQQWPPQQEITRPDSGNEEMESEPMDRDDKDDDDDDDEEEEDEGGGNYEIVASKPTSVSTGE | 598 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5914416 | 5916803 | + | CmoCh09G010850.1 | Cmo09g01085 | 389087 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo09g01085 | 598 | MobiDBLite | consensus disorder prediction | 42 | 57 | - | - | |
Cmo09g01085 | 598 | CDD | GT1 | 68 | 133 | - | - | |
Cmo09g01085 | 598 | CDD | GT1 | 416 | 480 | - | - | |
Cmo09g01085 | 598 | SMART | sant | 413 | 475 | IPR001005 | - | |
Cmo09g01085 | 598 | SMART | sant | 66 | 128 | IPR001005 | - | |
Cmo09g01085 | 598 | MobiDBLite | consensus disorder prediction | 535 | 549 | - | - | |
Cmo09g01085 | 598 | MobiDBLite | consensus disorder prediction | 37 | 69 | - | - | |
Cmo09g01085 | 598 | ProSiteProfiles | Myb-like domain profile. | 409 | 473 | IPR001005 | - | |
Cmo09g01085 | 598 | PANTHER | - | 2 | 591 | - | - | |
Cmo09g01085 | 598 | Pfam | Myb/SANT-like DNA-binding domain | 68 | 154 | IPR044822 | - | |
Cmo09g01085 | 598 | Pfam | Myb/SANT-like DNA-binding domain | 415 | 502 | IPR044822 | - | |
Cmo09g01085 | 598 | Gene3D | - | 417 | 478 | - | - | |
Cmo09g01085 | 598 | Gene3D | - | 70 | 131 | - | - | |
Cmo09g01085 | 598 | MobiDBLite | consensus disorder prediction | 230 | 253 | - | - | |
Cmo09g01085 | 598 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 2 | 591 | - | - | |
Cmo09g01085 | 598 | MobiDBLite | consensus disorder prediction | 336 | 384 | - | - | |
Cmo09g01085 | 598 | ProSiteProfiles | Myb-like domain profile. | 68 | 126 | IPR001005 | - | |
Cmo09g01085 | 598 | MobiDBLite | consensus disorder prediction | 349 | 383 | - | - | |
Cmo09g01085 | 598 | MobiDBLite | consensus disorder prediction | 557 | 582 | - | - | |
Cmo09g01085 | 598 | MobiDBLite | consensus disorder prediction | 535 | 598 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01052 | Cmo-Chr1:8334382 | Cmo09g01085 | Cmo-Chr9:5914416 | 0 | dispersed | |
Cmo02g00617 | Cmo-Chr2:3835565 | Cmo09g01085 | Cmo-Chr9:5914416 | 2.76E-119 | dispersed | |
Cmo09g01085 | Cmo-Chr9:5914416 | Cmo20g01084 | Cmo-Chr20:10264768 | 1.34E-21 | dispersed | |
Cmo09g01085 | Cmo-Chr9:5914416 | Cmo09g01086 | Cmo-Chr9:5930480 | 4.19E-79 | tandem | |
Cmo13g00415 | Cmo-Chr13:5187491 | Cmo09g01085 | Cmo-Chr9:5914416 | 8.63E-17 | transposed | |
Cmo01g01051 | Cmo-Chr1:8293827 | Cmo09g01085 | Cmo-Chr9:5914416 | 2.89E-15 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10391 | PF13837 | Myb_DNA-bind_4 | 7.50E-21 | CL0123 | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo09g01085 | - | - | cmos:111443426 | 969.148 |