Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g01089 ATGTCTACACTGAACCAAAGCAGCTCCCTCAACAATTGCACCAAGCTCCCCCTCCCACCCCATGACCAAATGACATCAACCCACAACAACGTAGTAGACGAAATCCAATCCCAACCCTTCGACTACTCGAAACGTGCTCAATGGTTACGCGCCGCCGTGCTAGGCGCCAACGACGGTCTCGTCTCAACCGCATCTCTCATGATGGGTATCGGCGCCGTCAAGCACGACGTTAAAGCCATGATCCTCACCGGTTTCGCCGGTCTCATTGCCGGTGCCTGCAGCATGGCGATCGGTGAGTTCGTCTCCGTTTACTCTCAATTGGATATAGAAATGGCCCATATAAGAAGAAACAAGGACTTGGAGGAAGAGGAGAGAGAGAAACTGCCAAACCCTCTTCAGGCGGCAGCTGCCTCGGCGTTGGCCTTTTCCATCGGAGCTATGGTGCCGCTACTGGCGGCGGCGTTCATTAGGGAGTATAGGGTTCGGCTAGGAGTTGTGGTGGCTGCAGTGACTATGGCTCTAGTAGGGTTTGGGTGGCTTGGGGCAGAGTTGGGGAAGGCACCAACGGTGAGGTCGGCGGTGAGGGTCTTGATCGGAGGGTGGACGGCGATGGCTGTGACTTTTGGGTTGACCAAGTTGATTGGATCAAGTGGACTATGA 660 55.0 MSTLNQSSSLNNCTKLPLPPHDQMTSTHNNVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIRRNKDLEEEEREKLPNPLQAAAASALAFSIGAMVPLLAAAFIREYRVRLGVVVAAVTMALVGFGWLGAELGKAPTVRSAVRVLIGGWTAMAVTFGLTKLIGSSGL 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5974664 5975323 - CmoCh09G010890.1 Cmo09g01089 389091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g01089 219 CDD Nodulin-21 47 188 - -
Cmo09g01089 219 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 23 216 - -
Cmo09g01089 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 23 216 IPR008217 GO:0005384|GO:0030026
Cmo09g01089 219 Pfam VIT family 49 125 IPR008217 GO:0005384|GO:0030026
Cmo09g01089 219 Pfam VIT family 124 211 IPR008217 GO:0005384|GO:0030026
Cmo09g01089 219 Coils Coil 104 124 - -
Cmo09g01089 219 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g01089 Cmo-Chr9:5974664 Cmo15g00607 Cmo-Chr15:2949497 5.98E-89 dispersed
Cmo09g01089 Cmo-Chr9:5974664 Cmo04g02561 Cmo-Chr4:18762840 7.30E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g01089 K22736 - csv:101210510 360.533