Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo09g01160 | ATGATAAAGCAAGCGCACTCATTGATTCAAATTCCCAACGAGCTCCAGTTCATCACAGCCATTACCAGATTCCAATTCCGTTCATCGATCCATCATTTCTCTGCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGGAATCATCGTCGCCGGTCGCCCATGGCCGCCTCCGCCGCTGGTAACCCTTCATCCTCCTCTTCGTCCTCCTCCAACCCTTTCATTTTCTCCCCCGATTCTCCCCCTAGACTCGCTCTCACACCCCATCAGATTAAGCTTTGTTCCGAAGCTCTTGAGGCCTTCAAGGAGAAGCTCCAGATGCCTGATGTCATCAACCAGGAGTTCGCCCGATTGCAGGCCCAGAGAATAACCGCATCGGATATGAAGAAAAATTGCTCTGTGGCTCTTGACAATGTCAACATCAGTAAGAATCGTTACACCGATGTATTACCCTTTGACGAGACTAGAGTTGTGCTCGACTCTTGTAAGGATTACAGACCTTCTGCAAAGGGTTATATCAATGCAAGCTTTATTTCCAGTTCCTCCTCAGAAAGCCTTTCTAAGTTTATTGCCACACAAGGTCCGTTACCACACACTTATGAGGATTTCTGGGAGATGACGGTGAAGTGTGGAGATTACTTTCCAGCTGAAGATGGTAGTAGAGATTTTGGTAATCTAGTGGTAGTCTCCAAATGGATAAAATCTTCCAATTCCTCTCTTATACTGCGCCATTTGGAAGTGAACCATAAAGAGTCAGAAGAACGTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCCGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGTTGAAGAGGCTGTATCATTTACCACCCGATCTCGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACTGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTATTGGAGACTTGTCTGCTTTAGATCTTGTCAGTACCATTTTTACATTTAGATCCCAGCGAATTGGAATGGTTCAAACACTGGATCAATACTTTTTCTGCTATAGAACCATCGTTGATCAACTACAAGACCTTATATCTGTCCCACAGTAG | 1119 | 45.4 | MIKQAHSLIQIPNELQFITAITRFQFRSSIHHFSAFQIRPLGNLTSTRSRNHRRRSPMAASAAGNPSSSSSSSSNPFIFSPDSPPRLALTPHQIKLCSEALEAFKEKLQMPDVINQEFARLQAQRITASDMKKNCSVALDNVNISKNRYTDVLPFDETRVVLDSCKDYRPSAKGYINASFISSSSSESLSKFIATQGPLPHTYEDFWEMTVKCGDYFPAEDGSRDFGNLVVVSKWIKSSNSSLILRHLEVNHKESEERVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILIGDLSALDLVSTIFTFRSQRIGMVQTLDQYFFCYRTIVDQLQDLISVPQ | 372 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7325057 | 7337632 | - | CmoCh09G011600.1 | Cmo09g01160 | 389162 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo09g01160 | 372 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 114 | 363 | IPR000242 | GO:0004725|GO:0006470 | |
Cmo09g01160 | 372 | Pfam | Protein-tyrosine phosphatase | 211 | 361 | IPR000242 | GO:0004725|GO:0006470 | |
Cmo09g01160 | 372 | Pfam | Protein-tyrosine phosphatase | 143 | 210 | IPR000242 | GO:0004725|GO:0006470 | |
Cmo09g01160 | 372 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE PTP1 | 211 | 369 | - | - | |
Cmo09g01160 | 372 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 59 | 210 | - | - | |
Cmo09g01160 | 372 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 300 | 310 | IPR016130 | GO:0016311|GO:0016791 | |
Cmo09g01160 | 372 | PRINTS | Protein tyrosine phosphatase signature | 346 | 356 | IPR000242 | GO:0004725|GO:0006470 | |
Cmo09g01160 | 372 | PRINTS | Protein tyrosine phosphatase signature | 297 | 315 | IPR000242 | GO:0004725|GO:0006470 | |
Cmo09g01160 | 372 | PRINTS | Protein tyrosine phosphatase signature | 174 | 181 | IPR000242 | GO:0004725|GO:0006470 | |
Cmo09g01160 | 372 | PRINTS | Protein tyrosine phosphatase signature | 192 | 212 | IPR000242 | GO:0004725|GO:0006470 | |
Cmo09g01160 | 372 | PRINTS | Protein tyrosine phosphatase signature | 330 | 345 | IPR000242 | GO:0004725|GO:0006470 | |
Cmo09g01160 | 372 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 279 | 354 | IPR000387 | GO:0016311|GO:0016791 | |
Cmo09g01160 | 372 | MobiDBLite | consensus disorder prediction | 44 | 77 | - | - | |
Cmo09g01160 | 372 | SMART | PTPc_3 | 113 | 365 | IPR000242 | GO:0004725|GO:0006470 | |
Cmo09g01160 | 372 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 94 | 366 | IPR029021 | - | |
Cmo09g01160 | 372 | Gene3D | Protein tyrosine phosphatase superfamily | 211 | 370 | IPR029021 | - | |
Cmo09g01160 | 372 | Gene3D | Protein tyrosine phosphatase superfamily | 88 | 210 | IPR029021 | - | |
Cmo09g01160 | 372 | SMART | ptp_7 | 260 | 362 | IPR003595 | - | |
Cmo09g01160 | 372 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 211 | 369 | - | - | |
Cmo09g01160 | 372 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE PTP1 | 59 | 210 | - | - | |
Cmo09g01160 | 372 | MobiDBLite | consensus disorder prediction | 61 | 77 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00602 | Cmo-Chr6:2968312 | Cmo09g01160 | Cmo-Chr9:7325057 | 7.13E-13 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo09g01160 | - | - | bhj:120086129 | 613.224 |