Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g01248 ATGGTTCACGAAGCGGCTGAGAATGGCGGAAGCGATATGGTAATTGACGGGAATGAACAGAAGCCGAAGAACATTGTTTCTAATGGATTCGATGCGAATTATCTCGAAATTTACTACGGCAAGCTTTTTCCTTTTGCTGATTTTTTCAAATGGATGTCTTATGGAAATGATGGCAAGCATCCGGGCAGTGATCATTCCTATATTGGGCGGAGAGAATTTTCATTCACCTTGGATAATGATATTTATCTACGGTTTCAATCTTTCAACAGTTTATCTGAAATGGAAAGTTCGACCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGCGTGGATCCTGCAAAGAGACACGCATATGCTGGTGCTAATGTATTTACTCCAGTGGAGAGAGAGCTAGTTTTTGATATTGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTGGATTGCTGGCCTTTAATGACTGCTGCGATCAAAGTGATTGATACTACTCTCCGAGATGACTTCGGATTTAACCACATTCTGTGGGTATTTAGTGGTCGACGTGGTGTTCATTGTTGGGTCTGTGATGGCAAAGCAAGAAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGACTATTTCCATTTATATCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCGGTTCTTCATCCATTTCTCGCGAGATCATACATAGAAGTTCTCAAGGATAGTTTTGAATCAAAATTGCTTTGTAGTCAAAAGATTTTCTCAACTGAGGAGAGATATGAGAAAATATTAGATATGATTCATGATGAATCCATTACCTCGGAGCTTCGGGGAAGGTGGCAAGATAATAGGCGACCTTCTAAAAATGATGTTAATTTAGTAAGATGGGAGCAACTAAAGAATATGTTGCAATCAGGGAAACATAAGTCACCAGGAATGCGTAGGCATGTTGAAGAGATCGTTTTCTCTTTTACCTACCCTAGGCTTGATTTGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATCTGTGTCCCGATTGACCCTGAACGCTGTGATGAGTTTGATCCTACTACTGTGCCAACTGTTGCCCAGCTCCTAGAAGAACTTAATGCAGCAGATATGGAAGTAGATAGTGAGACTGACTGGGATAGAACCTCTCTTGGGGAGTCGATTAGGTTTTTCAGATCGGCATTCTTACAGCCATTACTGAAATCATGCAAGGAGGAGATAGAATCTTCCTACAATGCTAAAGTTCAACAGTCGAAGAATCCTCTGAGTTGGTAG 1353 40.65 MVHEAAENGGSDMVIDGNEQKPKNIVSNGFDANYLEIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYIGRREFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYAGANVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVNLVRWEQLKNMLQSGKHKSPGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLKSCKEEIESSYNAKVQQSKNPLSW 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10738363 10746570 + CmoCh09G012480.1 Cmo09g01248 389250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g01248 450 PANTHER DNA PRIMASE SMALL SUBUNIT 41 450 IPR014052 GO:0003896|GO:0006269
Cmo09g01248 450 Gene3D DNA primase, PRIM domain 23 431 - -
Cmo09g01248 450 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 36 388 IPR014052 GO:0003896|GO:0006269
Cmo09g01248 450 PANTHER DNA PRIMASE 41 450 - -
Cmo09g01248 450 SUPERFAMILY Prim-pol domain 31 396 - -
Cmo09g01248 450 CDD AE_Prim_S 44 379 IPR014052 GO:0003896|GO:0006269
Cmo09g01248 450 Pfam DNA primase small subunit 137 370 IPR002755 GO:0003896|GO:0006269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g01248 K02684 - csv:101203146 870.922