Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g01328 ATGAGGGATTGGCTTCCACTGTGGAAAAGAGCCGAGAGGAGGAACAATCTGGTCCCTAAATCTCCTGAGCCAGTCACTGTGAAGCAGATGCAATCCACAACTGGTGGTGCTACTGGCAGTCGTAGCGGCGGCGGCGGTAGCGGCGGCGGACTTGCTCGCTTCCGCTCTGCTCCGGCTGCCTGGTTGGAAGCGCTTTTGGAGGACGAGGAGGAGGACCTACTCAGGCCTAATCAGTGCTTGACTCAGCTTCTCGCTGGCAACTCCTCCGACCTAGACTCCCCCGCGGATCAGGCCTTGTTCGAGCCCAATCCCTCCGCTGGTTTCCAGAGGCAAAATAGCTCTCCGGCTGAGTTTCTCGGCGCCTCCGGAATCGGGGAAGGATTTTACTCTTCCTATGCTATCAATTCCTCGGCCGCTCTCGAGATCTCTCCCACTTCCAAGCGGGGGAGAGAAGTCGACGCGCAGAACTTCCCGCCCAAATTTTCACCGCAACTGAAAAGGGAAGGAAGTGGAGTATCGAGTTTGATAGACATGGAAATGGAGAAGCTATTGGAGGACTCCGTGCCCTGCCGTGTGAGGGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGATAAGGTAAATTATATCATGATTGATCATTAG 717 54.95 MRDWLPLWKRAERRNNLVPKSPEPVTVKQMQSTTGGATGSRSGGGGSGGGLARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLAGNSSDLDSPADQALFEPNPSAGFQRQNSSPAEFLGASGIGEGFYSSYAINSSAALEISPTSKRGREVDAQNFPPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKVNYIMIDH 238
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 12035286 12036811 - CmoCh09G013280.1 Cmo09g01328 389330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g01328 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 238 IPR011598 GO:0046983
Cmo09g01328 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 201 231 IPR036638 GO:0046983
Cmo09g01328 238 MobiDBLite consensus disorder prediction 25 41 - -
Cmo09g01328 238 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 230 - -
Cmo09g01328 238 MobiDBLite consensus disorder prediction 15 50 - -
Cmo09g01328 238 PANTHER TRANSCRIPTION FACTOR BHLH80 43 230 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g01328 Cmo-Chr9:12035286 Cmo14g00440 Cmo-Chr14:2099332 6.10E-23 dispersed
Cmo09g01328 Cmo-Chr9:12035286 Cmo11g00848 Cmo-Chr11:4312359 8.81E-24 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g01328 - - csv:101209773 276.944