Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00017 | ATGTTTTCCTCCTTCACAAAAGCTGGTGCCTATTCGTGCAGCTATGTGCATGGATCTCCATTGTTAGAAATCTCAAGTGCATTTGAATCCCGAGAAAGGGCTGAAAAATTAGCCGCCGCTATTGGAAGGATCTTGCTATTGGACCTTGTCATCAGAAATGAAGACCGGCTCCCTTGTCGTCTTCTTCGTTGGCGTGGAAATTCTGCAAATTTGCTTTTGGCTGATAGAATGGCGTGTGCAAATTTGAATGCATTTGAGGAAGCCTTTGATTCTGCCATTAAACGATACAGACCAAAAGTCATTTCAACGCTTCAAAAAGAAAGAAGGGGAACTTCAATGGACAATCGACCAAGTTCTAGTTCAGGGTTGGTTTCAGAGACCTCTGAACTTTCTGATAATGTTGAATCCCCAAAATCTAGTAACCTAAGTGTTAAAAGTCAAATATCAGATGAAGTAATGCTCTGTGATTTTAACATTGTGGCTATTGACTCTGGTGTTCCTCGTCGTCCTCCTGCTGGAAAACGTGCTAATGACCAGTCAATTTACCCAAAATTAGTTGAGTTGTTACTCAACAGTTCCGAGTTCTCCTCTAATCTATTGCATGACATTACGGGAGGGAAATTAGGGTTCCCTTCATTAGCTGATGCCAACTCAACTTCTGGCATACAGCTTACAGATATGAGTTCTATTGTCCATGAATTTCGGTATGGGTTTCGTGCTGCTCTTAGGGACTTGCAAGGATTTCACATATTTTTGCTTACCCTTCACCAAAAGTTAGACAACTCATTACGAGCATTCATGAATATCATAAATAAATTTCCCTTGGGGGAATCCGATAAAGAGGACTCGGGGGTTCCCGAGTCCCATTTGCAGGCTTCTACCACTATTCATTGTTTATCTCCACGGGGTAAGGAACGAGTCTCCAGTGACGGTAATATAGATGTTACAGAGTCAGCTCCAAGATCGTCATCGTCAGGAAATAGAGAAAGCTCGGACTTATCTTCTCCCTTGTCACGAGATAGCTCACAAGGAAAGTTACACAGGGGAGGTGCAGAGCCCATTCATAGCCTTCGTTTGACTGCAAAGCTTCGAGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCAAATAAAGAATTGGATATGTGGAATGAAGTGTTGAAGAATGAAGCTGTTAAACTCTGCCAGGAGAATAAATTTAATACTGGGTTTTTTGAGGGCAGCGATAGTCATGGAGTTGTGGATGCTTATGAATTAAAGGTGAGACTTGAGCACATTCTTGAAAGGATTGCACTGATATCTGAGGCTGCAAATACAGAAAGGCCTTCTTCAGTTACACCTGCCTTGTTTATAGGTGGTGCCTTGGCTGCAAGATCTGTTTACACTCTTCAGCATCTAGGAGTTACTCATATTTTATGTCTCTGCTCCAATGAAATTGGGCAGTCAGATTCTCAGTTTCCTGATCTATTTGAATACAAGAACTTTTCAATAAGTGACAATGAAGACTCAAACATCAGCAGTATCTTTGAGGAAGCTTCTGATTTTGTTGATGACGTTGAAAGAAAGGGTGGGAAGGTCCTGGTTCACTGTTTTGAAGGGAAAAGCAGAAGTGCCACATTAGTTCTTGCTTACTTGATGCTCAGAAAGAAATACACACTGCTAAAAGCATGGAATGCTTTGAAACGAGTTCACCGTCGAGCTCAGCCTAATGATGGGTTTGCTAAAACTTTGTTAGAATTAGATCGAAGAATACATGGAAAAGTTTCCATGGAGTGGCAGTCACGAAAACCAACTATGAAAGTCTGCCCAATTTGTGGGAAAAATGCTGGACTGAGCAGTAGCTCACTGAAACTTCATCTGCAAAAATCACACAAGAAGCTATCATCTGGGAGCGTAGACAGTGCAATGACCATGGAAATACAGAAAGCACTAACAGCTCTGAAAATCAGTCGTGGCGGAAGCGTGAGCCCAACCCAGAGGCAATCTCTTCTGATCTTAGATGAATAG | 2007 | 41.9 | MFSSFTKAGAYSCSYVHGSPLLEISSAFESRERAEKLAAAIGRILLLDLVIRNEDRLPCRLLRWRGNSANLLLADRMACANLNAFEEAFDSAIKRYRPKVISTLQKERRGTSMDNRPSSSSGLVSETSELSDNVESPKSSNLSVKSQISDEVMLCDFNIVAIDSGVPRRPPAGKRANDQSIYPKLVELLLNSSEFSSNLLHDITGGKLGFPSLADANSTSGIQLTDMSSIVHEFRYGFRAALRDLQGFHIFLLTLHQKLDNSLRAFMNIINKFPLGESDKEDSGVPESHLQASTTIHCLSPRGKERVSSDGNIDVTESAPRSSSSGNRESSDLSSPLSRDSSQGKLHRGGAEPIHSLRLTAKLRDFHKFAKVDAESNKELDMWNEVLKNEAVKLCQENKFNTGFFEGSDSHGVVDAYELKVRLEHILERIALISEAANTERPSSVTPALFIGGALAARSVYTLQHLGVTHILCLCSNEIGQSDSQFPDLFEYKNFSISDNEDSNISSIFEEASDFVDDVERKGGKVLVHCFEGKSRSATLVLAYLMLRKKYTLLKAWNALKRVHRRAQPNDGFAKTLLELDRRIHGKVSMEWQSRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQSLLILDE | 668 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 117082 | 120158 | - | CmoCh10G000170.1 | Cmo10g00017 | 389363 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00017 | 668 | MobiDBLite | consensus disorder prediction | 312 | 342 | - | - | |
Cmo10g00017 | 668 | MobiDBLite | consensus disorder prediction | 104 | 142 | - | - | |
Cmo10g00017 | 668 | MobiDBLite | consensus disorder prediction | 278 | 351 | - | - | |
Cmo10g00017 | 668 | Gene3D | - | 19 | 271 | IPR036940 | GO:0016301 | |
Cmo10g00017 | 668 | Pfam | Actin-fragmin kinase, catalytic | 14 | 166 | IPR015275 | - | |
Cmo10g00017 | 668 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 441 | 586 | IPR020422 | GO:0006470|GO:0008138 | |
Cmo10g00017 | 668 | Pfam | Dual specificity phosphatase, catalytic domain | 457 | 582 | IPR000340 | GO:0008138|GO:0016311 | |
Cmo10g00017 | 668 | MobiDBLite | consensus disorder prediction | 114 | 142 | - | - | |
Cmo10g00017 | 668 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 179 | IPR011009 | - | |
Cmo10g00017 | 668 | SMART | dsp_5 | 441 | 583 | IPR020422 | GO:0006470|GO:0008138 | |
Cmo10g00017 | 668 | CDD | DSP | 442 | 579 | - | - | |
Cmo10g00017 | 668 | PANTHER | DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN | 12 | 667 | - | - | |
Cmo10g00017 | 668 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 441 | 585 | IPR029021 | - | |
Cmo10g00017 | 668 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 528 | 538 | IPR016130 | GO:0016311|GO:0016791 | |
Cmo10g00017 | 668 | Gene3D | Protein tyrosine phosphatase superfamily | 418 | 587 | IPR029021 | - | |
Cmo10g00017 | 668 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 506 | 562 | IPR000387 | GO:0016311|GO:0016791 | |
Cmo10g00017 | 668 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 | 12 | 667 | IPR035010 | GO:0004721|GO:0009737|GO:0043622 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g01140 | Cmo-Chr8:7275567 | Cmo10g00017 | Cmo-Chr10:117082 | 2.23E-20 | dispersed | |
Cmo10g00017 | Cmo-Chr10:117082 | Cmo18g00757 | Cmo-Chr18:9203880 | 3.77E-20 | dispersed | |
Cmo10g00017 | Cmo-Chr10:117082 | Cmo04g00237 | Cmo-Chr4:1182084 | 2.81E-20 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00017 | K14165 | - | csv:101220184 | 1149.81 |