Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00024 ATGGCTCTGTCGAAAGATGGGCAACGACATCCTCTGGTGCCAAGCTTTGTGTATTCTGCTAATTGGGGGATTTCCCAAACAGTGGTTAGGACGACGCCGGCATGGAGTTACGGCAGGAGCTTCCCAATTGAAGCTCCGAAAGAGAAGATAAAGATGTATTCACCGCCCTTCTACGCCGCTTGTACAGTAGGCGGCATTTTGAGTTGTGGACTCACCCACATGACTGTCACCCCCCTCGACCTCGTCAAGTGCAATATGCAGATCGACCCTGCAAAGTACAAGAACATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGAGAGGGTTCTTCCGGGGTTGGGTGCCAACGTTGCTTGGTTACAGTGCTCAGGGGGCGTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTACTATTCTGATATAGTTGGAGCAGAGAATGCAGCCAAGTACAAAACTTTCATATACCTTGCTGGCTCAGCATCTGCAGAAGTAATTGCCGATGTCGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGTGTCCAAACGCAACCTGGTTTTGCTCGGGGGTTGTCAGATGGGCTCCCAAAGTTTGTCAAGTCTGAGGGTGTTCTTGGGCTCTATAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCGTATACCATGATGAAATTTGCTTCTTTCGAAACAATTGTTGAGATGCTGTACAAGTATGCCATCCCAAGGCCAAAAGAACAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGCTTTGCCGGTGGATATGTGGCCGGCGTCCTCTGTGCCGTAGTCTCACACCCGGCTGATAATCTCGTCTCTTTTCTCAACAACGCAAAGGGCGCAACCGCCGGGGATGCTGTGAGGCAGCTGGGTTTATGGGGTCTGTTCACTCGAGGCCTTCCGCTTCGGATTGTTATGATTGGAACTCTTACCGGGTCTCAATGGGGAATATATGACGCATTCAAAGTTTTCGTTGGACTGCCAACAACGGGTGGAGCTGCTCCTGCTCCTGCCGCTAACAAGTGA 1053 50.52 MALSKDGQRHPLVPSFVYSANWGISQTVVRTTPAWSYGRSFPIEAPKEKIKMYSPPFYAACTVGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIVGAENAAKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGVLGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLPTTGGAAPAPAANK 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 137127 139267 + CmoCh10G000240.1 Cmo10g00024 389370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00024 350 SUPERFAMILY Mitochondrial carrier 58 329 IPR023395 -
Cmo10g00024 350 Pfam Mitochondrial carrier protein 59 142 IPR018108 -
Cmo10g00024 350 Pfam Mitochondrial carrier protein 154 241 IPR018108 -
Cmo10g00024 350 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 31 348 IPR044677 GO:0005315|GO:1990547
Cmo10g00024 350 Gene3D Mitochondrial carrier domain 58 334 IPR023395 -
Cmo10g00024 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 56 140 IPR018108 -
Cmo10g00024 350 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 31 348 - -
Cmo10g00024 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 237 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00024 Cmo11g00007 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00024 Cmo-Chr10:137127 Cmo15g00842 Cmo-Chr15:4272535 0 dispersed
Cmo10g00024 Cmo-Chr10:137127 Cmo11g01578 Cmo-Chr11:11333119 0 wgd
Cmo10g00024 Cmo-Chr10:137127 Cmo14g00771 Cmo-Chr14:3917356 7.25E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00024 K15102 - csv:101220423 600.127