Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00061 ATGGCCGCCACCAACACCAATGTCGCCACCGGCGTCGACGACCGCGTTTTGGCCACTGCGCAGCAGATCGTCAAGAGCCTCAATACCCCTAAAGAGGTTCGTGAGGACATGCTCTTGATTCTCTCCAATTTCGACAATCGCCTTTCCAGTATCGGTAGCATGATCAACAGTGACAACAACTCCAACACCGAGAACGATAGGTTGGACGCCGCCGAGAAGGTGATTCTACGTTGGGATCCTAATTCAGATGTACCGAGACCGTCGCTTAATTGGGAGGACTCGCCGGACGAGGCGGCTGAATATTTATCTGCGGTGGATGATATACGCCGGCTAGTTGAAGACCTGTCAATTGGGTCCGAGTCGACCAAGATCGTTGCCCGGGCGGAAAACGCGATCCAAATGGCTATGTGTCGGCTCGAGAGCGAATTTCGCCATATCCTGATCCAGAGCACAGTTCCTCTCGACGCCGATCGGCTCTATGGCTCGATCCGAAGAGTTCACCTCTCATTTGCGTCCCATTACAGTGAAATTGACGACGAATTCGAGAGTTTCGGCGAGGAAAGTCGCAATTCCGGGCGATTCCATGAGCGAGGTGCGACAATTGGAGAAGATTCTTGGGTCGATTTGATCCATCCCGATGCGGCTGTTGATCTCTCGGAAATTGCGGACCGTATGATTCGCTCTGGCTACGAAAAGGAGTGTGTTCAAGTCTACAGCACCGTTCGTCGCGATGCTTTGGACGAGTGTTTGGCAATTCTTGGCGTCGAACGGCTCAGCATTGAGGAGGTTCAGAAAAGTGACTGGAAATTTCTAGACGAGAAGATGAAGAAATGGATCCAGGCCGTCAAAATTACTGTCCGGTTGATTTTGGTCGGTGAGAAGAGGCTCTGTGACCAGATTTTTAGTGGCGCCAATGAATCCCAGGAGATTTGTTTTAACGAAACAGCAAAAGGGTGTGTAATGCAGCTGCTAAATTTCGGTGAGGCAGTGGCTATTGGGAAGAGGTCACCGGAGAAGCTGTTCCGAATCTTGGATATGTATGACGCTCTGGCTGGCGTCTTGCCACACTTGGAAGCCATGGTTTCCGATGAGTTTCTGATCAGTGAAGTACACGGAGTATTGTCTGGACTGGGAGAAGCAGCCACGGGAACTTTTGTAGAGTTTGAGAACGCTATTCTTAGCGAAAATTCAAAGAAGGCAATGCAAAATGCCGATATTCACCCGCTCATTCGATATGTAATGAATTATGTTAGGCTGCTGGTTGATTACAGTAAGACAATGAACTCTCTTTTAGAAGATGAGGAAGAACAAGACATGCCAAATGAGAAGGATAACGATGATATACTGCAGTTGGAAAGCACGTCGCCTTTGGCTCGTCGACTGTTCATGTTGTTATCGTCTCTAGAGTCCAATCTTGTGGAAAAATCTAAATTTTATGAGGATGTTTCTATGCAGTTCATATTCCTAATGAACAATATACTGTACATAGTGAAAAAGGTGAAAGATTCTGAGCTTGCCCAGCTGCTTGGCGATAACTGGCTTCGCAGGCGTAGCGGCCAAATTCGCCAATACGAAACCACTTACCTTAGAGCCTCTTGGAGCAAAGTCTTGTCTTGCTTAAAGGATGAAGGCATTGGTGGGAGCCCAAGCAACGCCTCCAAGGTAGCTTTGAAGGAGAAGTTCAAGAATTTCAATGCAGGTTTTGAGGAAATCTGCAGGGTTCAAACAGCTTGGAAGGTGTCGGATACTCAACTGCGCGATGAGCTGATCATATCGGTTTCGGAGAAGGTGATTCCTGCGTACCGCTCGTTCTTAGGAAGGTTTAGAAATCAGTTGGAGAGCGGAAGGCATTCTGGGAAGTACATAAAGTACACGCCAGAGGATTTAGAGAACTCTCTATCAGATTTGTTTGAAGGATCACTTGCTGTATCACATCACTTGAGAAGAAAGAGTACTTGA 1959 47.73 MAATNTNVATGVDDRVLATAQQIVKSLNTPKEVREDMLLILSNFDNRLSSIGSMINSDNNSNTENDRLDAAEKVILRWDPNSDVPRPSLNWEDSPDEAAEYLSAVDDIRRLVEDLSIGSESTKIVARAENAIQMAMCRLESEFRHILIQSTVPLDADRLYGSIRRVHLSFASHYSEIDDEFESFGEESRNSGRFHERGATIGEDSWVDLIHPDAAVDLSEIADRMIRSGYEKECVQVYSTVRRDALDECLAILGVERLSIEEVQKSDWKFLDEKMKKWIQAVKITVRLILVGEKRLCDQIFSGANESQEICFNETAKGCVMQLLNFGEAVAIGKRSPEKLFRILDMYDALAGVLPHLEAMVSDEFLISEVHGVLSGLGEAATGTFVEFENAILSENSKKAMQNADIHPLIRYVMNYVRLLVDYSKTMNSLLEDEEEQDMPNEKDNDDILQLESTSPLARRLFMLLSSLESNLVEKSKFYEDVSMQFIFLMNNILYIVKKVKDSELAQLLGDNWLRRRSGQIRQYETTYLRASWSKVLSCLKDEGIGGSPSNASKVALKEKFKNFNAGFEEICRVQTAWKVSDTQLRDELIISVSEKVIPAYRSFLGRFRNQLESGRHSGKYIKYTPEDLENSLSDLFEGSLAVSHHLRRKST 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 282379 284337 + CmoCh10G000610.1 Cmo10g00061 389407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00061 652 Pfam Exo70 exocyst complex subunit 276 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo10g00061 652 Gene3D Exocyst complex component Exo70 87 645 - -
Cmo10g00061 652 SUPERFAMILY Cullin repeat-like 69 638 IPR016159 -
Cmo10g00061 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 49 651 IPR004140 GO:0000145|GO:0006887
Cmo10g00061 652 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 49 651 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00061 Cmo13g00835 CCT
Cmo10g00061 Cmo11g00037 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00061 Cmo-Chr10:282379 Cmo14g01223 Cmo-Chr14:10395134 1.36E-151 dispersed
Cmo18g00956 Cmo-Chr18:10655880 Cmo10g00061 Cmo-Chr10:282379 1.95E-118 dispersed
Cmo10g00061 Cmo-Chr10:282379 Cmo11g00037 Cmo-Chr11:157117 0 wgd
Cmo10g00061 Cmo-Chr10:282379 Cmo13g00835 Cmo-Chr13:7754168 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00061 K07195 - csv:101205970 1124.77