Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00063 ATGGCGCTTCTAAGTTTTTCGCCGACCTTCGTTCTTGTGGCTTACCGTTCCTTCTTTAAATCCGGCTTCCATAATATTAGCCATCAAGGACCAGATGTTTACAGTGAAACACCTAGTAAGGATCTACATATTTCGACTGTAAAGAGGCTGCCTGCCCGTCTCAAGGCCAGAGGCCTCTCGCTCAAAGAAGAAGGCAAATTCTACTGCTTCTCCAAAAACCGCTTTTATTCCCCTCCTTCCTACCCTTTCATCGGCTGCTTGATCTCTTTTTACAAAAACCGGCGCCGCCTTCTAAGCTGGTACACCCACCTCCTTTCCCACTCTCCCACTCAGACCATTGTGGTGAATCGCCTTGGTTCGAGGCGGACCGTTGTCACCGCCAACCCCGCCAACGTCGAGCACATGCTCAAGACCAATTTTGTTAACTACCCTAAAGGGAAGCCGTTTACTGATATACTCGGCGATCTCCTCGGCTGTGGCATTTTCAATGTCGACGGCGATTTATGGTCCACCCAACGCAAGCTTGCTAGCCATGAATTTTCCGCTAAGTCCGTTAGGGAATTCGTGGTTAAGACACTTGAAGATGAAGTTCATCTCCGTTTGATTCCGTTGCTCCATAACGCTGCTCGAACTAACGCCGTCCTCGATTTGCAAGATGTCTTGGGAAGACTCGCTTTTGACACCGTTTGTAAGGTGACGGTAGGTACAGATGAGCAGTGCTTGGACATGTCGCGCCCAATACCGGCAATAGTAAATTCATTGGACACGGCAACTGGGATCAGCGCAAGGAGGGCAGTAGCGCCACTTTTTGTCACGTGGAAGGCCAAGCGCATGCTCAACGTCGGCTCCGAAAAGAAGCTCAAAGAAGCGGTGGAAATGGTCCATGAATGGGTCTCCAACATCATTCGTAACAGAAACCTGAACAATAGTAATACGCTCGATCATAACCACGCACACGGCGATTTGTTATCTCGCCTCTTGTCGGCCGGCCACAGCCAGGAAGTGATTAGAGACATGGTCGTCAGCTTCATAATGGCCGGCCGTGACACTACCTCCGCCGCCATGACGTGGCTCTTCTGGTTGCTCACAAAGCACCCCAAAGTCGAACAGGCCATAGTGGACGAAGCCATTAAATTGTCCGGCGATTCCGAAACTGCGTCGTTGGGTTATGGTTACGAAGAATTGAAGGATATGAAGTATTTGAAGGCGTGTTTATGCGAGTCCATGCGGCTATACCCGCCGGTGGCTTGGGATTCGAAGCACGCAGCGGCGCCGGATATTCTGCCGGATGGAACTCCGGTGAGGAAAGGGGACAGAGTCACGTATTTTCCGTATGGAATGGGGCGGATGGAGGAGCTGTGGGGGAAGGACCGACTCGAATTCAAACCGGACCGGTGGTTCCAAAACGGGGAGTTGAAACCGGTGAGTCCGTTCAAGTTCCCGGTGTTTCAAGCCGGTCCAAGGATGTGCTTGGGAAAGGAAATGGCGTTCATTCAGATGAAATACGTGATGGCCACGGTTTTGAAGCGGTTTGAATTTAGACCGGCGAATGAAAATGCGCCGGTTTTTGTCCCCTTGTTGACAGCTCATATGGCTGGTGGACTGAAGGTTTATGTCGGGGAAAGGAAAGAACAAAAGTCAACCATCTACGGGAAACCCCCCCTCGTGAGTTCTACTAGCCGCGCTGCCCTTTCTCCTCTTGTTTTCTCAGCCGCAGCCCGGACACTCGGCGACTTTCCCTCACCACCGCGCGACAGCCACCCTCCGGCCGACAGAGACCCACGCGAACGGAGCTTCCAGTGTGTTGTAGCAGCTTTTCAGGCTGCTTTCCTCGACTCCACGATTTATCTCCTGCACTGCGGACTCACGACGCAAGCGCAATCTGAACGCCGACGATTTAATTTTCACAGTGTTTGTGACGTTTTCCGGCGGCCCCGACGTGACTTCCGCGTTTTCAACAGTGTGCAAGGCCAGGGGATCTGA 1983 52.09 MALLSFSPTFVLVAYRSFFKSGFHNISHQGPDVYSETPSKDLHISTVKRLPARLKARGLSLKEEGKFYCFSKNRFYSPPSYPFIGCLISFYKNRRRLLSWYTHLLSHSPTQTIVVNRLGSRRTVVTANPANVEHMLKTNFVNYPKGKPFTDILGDLLGCGIFNVDGDLWSTQRKLASHEFSAKSVREFVVKTLEDEVHLRLIPLLHNAARTNAVLDLQDVLGRLAFDTVCKVTVGTDEQCLDMSRPIPAIVNSLDTATGISARRAVAPLFVTWKAKRMLNVGSEKKLKEAVEMVHEWVSNIIRNRNLNNSNTLDHNHAHGDLLSRLLSAGHSQEVIRDMVVSFIMAGRDTTSAAMTWLFWLLTKHPKVEQAIVDEAIKLSGDSETASLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAPDILPDGTPVRKGDRVTYFPYGMGRMEELWGKDRLEFKPDRWFQNGELKPVSPFKFPVFQAGPRMCLGKEMAFIQMKYVMATVLKRFEFRPANENAPVFVPLLTAHMAGGLKVYVGERKEQKSTIYGKPPLVSSTSRAALSPLVFSAAARTLGDFPSPPRDSHPPADRDPRERSFQCVVAAFQAAFLDSTIYLLHCGLTTQAQSERRRFNFHSVCDVFRRPRRDFRVFNSVQGQGI 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 287927 294608 + CmoCh10G000630.1 Cmo10g00063 389409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00063 660 PANTHER CYTOCHROME P450 71 540 - -
Cmo10g00063 660 PRINTS P450 superfamily signature 481 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 PRINTS P450 superfamily signature 490 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 Gene3D Cytochrome P450 63 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 SUPERFAMILY Cytochrome P450 67 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 Pfam Cytochrome P450 78 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 PANTHER CYTOCHROME P450 94B3 71 540 - -
Cmo10g00063 660 PRINTS E-class P450 group I signature 490 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00063 660 PRINTS E-class P450 group I signature 480 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00063 Cmo11g00039 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00017 Cmo-Chr6:117160 Cmo10g00063 Cmo-Chr10:287927 8.33E-135 dispersed
Cmo10g00063 Cmo-Chr10:287927 Cmo14g00504 Cmo-Chr14:2496929 2.01E-132 dispersed
Cmo11g01618 Cmo-Chr11:11556603 Cmo10g00063 Cmo-Chr10:287927 6.25E-102 dispersed
Cmo02g01808 Cmo-Chr2:10249208 Cmo10g00063 Cmo-Chr10:287927 5.10E-147 transposed
Cmo06g00465 Cmo-Chr6:2251502 Cmo10g00063 Cmo-Chr10:287927 2.29E-135 transposed
Cmo13g00317 Cmo-Chr13:3460255 Cmo10g00063 Cmo-Chr10:287927 4.20E-139 transposed
Cmo10g00063 Cmo-Chr10:287927 Cmo11g00039 Cmo-Chr11:163670 0 wgd
Cmo10g00063 Cmo-Chr10:287927 Cmo11g01617 Cmo-Chr11:11555442 5.62E-79 wgd
Cmo10g00063 Cmo-Chr10:287927 Cmo14g00730 Cmo-Chr14:3737519 6.10E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00063 K20665 - csv:101202989 815.068