Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00077 ATGAAGAAAGCAACAACAGGCAGCATCGTTCTTCTTTTAGTTTTGCTTTCTCTTCAAGACTTTGTTCATTTTGCATTGGCGCTACCTCCTTCAGAGAGTAATCAGGACGAGGAGCAATCTGCAACTACGAGACCTCTCGAGCAAGACAAAGAGCATTTTGAGGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATTCTTGAGGAGCATTTGCTGCCGTTTGTTGAGAAGGAGAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAATGATCTCTTCAGAGATCAGGAGCAGCACAAGATTCATTTTGATATAAATCATTGGCAGTGTGGATACTGTCGCAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTCGACAACAGACATTACGATCTTCTGAATGTTAGTCACGGGAAGTGCTTAGCTGATTTATGTGGGGCTTTACATTGTGACCTAAAGATGGATATCAAGTCACGTAAATCTAAATGCAAGCCTGCAGCTGCAGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATACTTGTTTTCCAATTAATGAGGGACCATCAGCAAGCCGTCTTCATGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGAGAAACAAAAGCCATTTTCTAGAGGAGCGGAGAGGCAACCAGGCATCTTTTACATGGCATCTTCAATACTGATTTTGATGTTGCTACCGATTTTCTATGTCATTGTCTATTTGCACCGCAGAGAATCGAGAAACGGAATCGAAGTGCTTAGAAGAATCTCAAAGTCTGGACGTAAAACCAAACCCTTGTAA 840 41.43 MKKATTGSIVLLLVLLSLQDFVHFALALPPSESNQDEEQSATTRPLEQDKEHFEEVHCSRERSRTAWNILEEHLLPFVEKENYQVSTKCRLHPNNDLFRDQEQHKIHFDINHWQCGYCRKSFRAEKFLDKHFDNRHYDLLNVSHGKCLADLCGALHCDLKMDIKSRKSKCKPAAAARNKHLCESLADTCFPINEGPSASRLHELFLHQFCGAHSCTEKQKPFSRGAERQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRISKSGRKTKPL 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 352006 357732 + CmoCh10G000770.1 Cmo10g00077 389423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00077 279 PANTHER ZINC FINGER PROTEIN-RELATED 15 278 - -
Cmo10g00077 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Cmo10g00077 279 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 15 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00077 Cmo-Chr10:352006 Cmo11g01644 Cmo-Chr11:11680047 8.26E-114 wgd
Cmo10g00077 Cmo-Chr10:352006 Cmo14g00711 Cmo-Chr14:3648985 1.93E-116 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10414 None None None None Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00077 - - csv:101218367 518.464