Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00077 | ATGAAGAAAGCAACAACAGGCAGCATCGTTCTTCTTTTAGTTTTGCTTTCTCTTCAAGACTTTGTTCATTTTGCATTGGCGCTACCTCCTTCAGAGAGTAATCAGGACGAGGAGCAATCTGCAACTACGAGACCTCTCGAGCAAGACAAAGAGCATTTTGAGGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATTCTTGAGGAGCATTTGCTGCCGTTTGTTGAGAAGGAGAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAATGATCTCTTCAGAGATCAGGAGCAGCACAAGATTCATTTTGATATAAATCATTGGCAGTGTGGATACTGTCGCAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTCGACAACAGACATTACGATCTTCTGAATGTTAGTCACGGGAAGTGCTTAGCTGATTTATGTGGGGCTTTACATTGTGACCTAAAGATGGATATCAAGTCACGTAAATCTAAATGCAAGCCTGCAGCTGCAGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATACTTGTTTTCCAATTAATGAGGGACCATCAGCAAGCCGTCTTCATGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGAGAAACAAAAGCCATTTTCTAGAGGAGCGGAGAGGCAACCAGGCATCTTTTACATGGCATCTTCAATACTGATTTTGATGTTGCTACCGATTTTCTATGTCATTGTCTATTTGCACCGCAGAGAATCGAGAAACGGAATCGAAGTGCTTAGAAGAATCTCAAAGTCTGGACGTAAAACCAAACCCTTGTAA | 840 | 41.43 | MKKATTGSIVLLLVLLSLQDFVHFALALPPSESNQDEEQSATTRPLEQDKEHFEEVHCSRERSRTAWNILEEHLLPFVEKENYQVSTKCRLHPNNDLFRDQEQHKIHFDINHWQCGYCRKSFRAEKFLDKHFDNRHYDLLNVSHGKCLADLCGALHCDLKMDIKSRKSKCKPAAAARNKHLCESLADTCFPINEGPSASRLHELFLHQFCGAHSCTEKQKPFSRGAERQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRISKSGRKTKPL | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 352006 | 357732 | + | CmoCh10G000770.1 | Cmo10g00077 | 389423 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00077 | 279 | PANTHER | ZINC FINGER PROTEIN-RELATED | 15 | 278 | - | - | |
Cmo10g00077 | 279 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 115 | 136 | IPR013087 | - | |
Cmo10g00077 | 279 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 15 | 278 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00077 | Cmo-Chr10:352006 | Cmo11g01644 | Cmo-Chr11:11680047 | 8.26E-114 | wgd | |
Cmo10g00077 | Cmo-Chr10:352006 | Cmo14g00711 | Cmo-Chr14:3648985 | 1.93E-116 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10414 | None | None | None | None | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00077 | - | - | csv:101218367 | 518.464 |