Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00083 | ATGAAAGTGGGCTCCAGCCATCCAATTGTGATCCCGTTTTTCGTTGGAGCCACGCCTATAAAGAAGAAGACCAAGTCTAACACTACTGCCAATTCTTTTGCTTGCCGGCAAACTCCCTTCGCTCGCAGCCGGAAAATGGCTTTACCTTCCCCCAAACTCCTTCCATTCTTAGTTTTTCTCTCCGTCCTTTTCCATGTCCATGCCCGACTGAACATTGATCCTTCAGATCTCAGAGCCTTTTCTATCATCAAGAATAACTTGGGTATTGACGGTCAACTCTCCCCCTACCCATGCGATAACGCCGGTGTATTCTGCGAGAGACGGCTCTCCAGCAACGGCACTTACGTTTTGAGGGTCACCAGGCTCATTGTCAAGTCCAAAGATCTTGCTGGTTCTCTTCCTCCGGCTATCGGCCGGCTATCGGAGCTGAAAGAGCTTACGATTTCTAATAATCAACTCGTTGACCAAGTGCCTGCCCAAATCGTCGACTGCCGGAAATTGGAAGTTCTCGATCTCCAAAACAACCACTTTTCTGGAAAAGTTCCGTCCGGATTGTCCTCGTTGACTCGCCTTCGGGTCATCGATCTTTCGTCCAATAAGTTCTCGGGGAGTTTGGATTTCTTGAAGTATTTTCCCCATTTGGAAAGTCTCTCCATAGCCAACAATTACTTCACGGGGAGAATCCCAGCTTCAATTCGTTCTTTTCGCAATCTTCGAGTCTTCAACTTCTCTGGAAACCCTCTTCTCGAAAGTTCATACCCCATCGTGAAAGGCGTTGAGTTCTACTCAACTACCGAAGTTCCCAAGCGTTATAAGTTATTAGCTGAGAAGTCCAGTACGAAAGGCAATCACAGTGCCGCCGCCACAGCGCCAACTTCGAGTGCTCAAGCTCCATCTCCTGCGGCCTCACCTCCTCATAGGAACCGGAAGAATAAAGCAAAGATAGTACTTGCTTGGATTCTTGGGTTCCTCGCTGGAGCAATTGCTGGAAGTTTGTCAGGGTTTATCTTTTCACTAATGGTTAAACTCATCATAGCAGTTATAAAAGGTGGAAGCAAAAATTCGGGACCCTCAATATTTGCACCTAAGCTTATAAAACGAGAGGATCTGGCTTTTCTAGAGAAAGACGATGCACTAGCATCGCTCGAACTGATTGGAAAAGGTGGATGTGGAGAAGTTTACAAGGCGGAATTACCAGAAAAAAGCGGAAAAATGTTTGCGATTAAGAAGATAACTCAGCCCCCAAAGGACGCGGCTGAGTTAGTTGACGAGGATAGCAGGTTTATGAGCAAGAAAATGCGTCAGATCAAGTCAGAGATCAGAACTGTGGGTGAAATCCGGCATCGTAATCTTCTTCCTCTTGTGGCCCATGTCCCCCGTCCTGATTGCCATTACCTTGTGTACGAGTTGATGAAGAATGGCAGCTTGCAAGATATATTGAATCAGGTTTCGGGAGGAGTGAAAGAACTAGATTGGCTTACTCGGCATAACATCGCTCTCGGAGTGGCATCTGGGCTGGAGTATCTTCACATGAACCATACCCCGCGTATTATTCACAGGGATCTGAAGCCTGCAAATGTTTTGCTTGATGACGACATGGAAGCTCGAATTGCTGATTTTGGGCTGGCAAAAGCAATGCCAGATGCCCAAACTCACATGACAGCTTCAAATGTTGCAGGTACCGTAGGATACATCGCACCAGAGTATCATCAGACCTTGAAGTTCACTGATAAGTGCGATATATACGGCTTTGGGGTTCTGCTTGGTGTCTTGGTGATCGGGAAACTTCCATCTGATGAGTTTTTCCAGGACACGGATGAGATGAGTTTGGTTAAGTGGATGAAGAATATGATGACTTCGGATAATCCTAGGAGAGCCATTGATCCGAAGCTCCTGGGAAATGGCTGGGAGGAGCAAATGCTCTTGGCCCTCAAAATTGCCTGCTTTTGCACTATGGATAATCCAAAAGAGAGGCCTAACAGTAAGGATGTCAGATGCATGCTGTCACAGATCAAGCACGATGTACTTGAAACTTCCTCTCTAAACGTCTAA | 2052 | 46.54 | MKVGSSHPIVIPFFVGATPIKKKTKSNTTANSFACRQTPFARSRKMALPSPKLLPFLVFLSVLFHVHARLNIDPSDLRAFSIIKNNLGIDGQLSPYPCDNAGVFCERRLSSNGTYVLRVTRLIVKSKDLAGSLPPAIGRLSELKELTISNNQLVDQVPAQIVDCRKLEVLDLQNNHFSGKVPSGLSSLTRLRVIDLSSNKFSGSLDFLKYFPHLESLSIANNYFTGRIPASIRSFRNLRVFNFSGNPLLESSYPIVKGVEFYSTTEVPKRYKLLAEKSSTKGNHSAAATAPTSSAQAPSPAASPPHRNRKNKAKIVLAWILGFLAGAIAGSLSGFIFSLMVKLIIAVIKGGSKNSGPSIFAPKLIKREDLAFLEKDDALASLELIGKGGCGEVYKAELPEKSGKMFAIKKITQPPKDAAELVDEDSRFMSKKMRQIKSEIRTVGEIRHRNLLPLVAHVPRPDCHYLVYELMKNGSLQDILNQVSGGVKELDWLTRHNIALGVASGLEYLHMNHTPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHMTASNVAGTVGYIAPEYHQTLKFTDKCDIYGFGVLLGVLVIGKLPSDEFFQDTDEMSLVKWMKNMMTSDNPRRAIDPKLLGNGWEEQMLLALKIACFCTMDNPKERPNSKDVRCMLSQIKHDVLETSSLNV | 683 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 371698 | 373749 | - | CmoCh10G000830.1 | Cmo10g00083 | 389429 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00083 | 683 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE | 51 | 673 | - | - | |
Cmo10g00083 | 683 | Gene3D | Ribonuclease Inhibitor | 75 | 186 | IPR032675 | - | |
Cmo10g00083 | 683 | MobiDBLite | consensus disorder prediction | 278 | 308 | - | - | |
Cmo10g00083 | 683 | Gene3D | Ribonuclease Inhibitor | 187 | 257 | IPR032675 | - | |
Cmo10g00083 | 683 | Gene3D | Transferase(Phosphotransferase) domain 1 | 471 | 681 | - | - | |
Cmo10g00083 | 683 | Pfam | Leucine rich repeat | 142 | 201 | IPR001611 | GO:0005515 | |
Cmo10g00083 | 683 | Pfam | Protein kinase domain | 382 | 662 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo10g00083 | 683 | MobiDBLite | consensus disorder prediction | 278 | 301 | - | - | |
Cmo10g00083 | 683 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 51 | 673 | - | - | |
Cmo10g00083 | 683 | Gene3D | Phosphorylase Kinase; domain 1 | 371 | 470 | - | - | |
Cmo10g00083 | 683 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 517 | 529 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo10g00083 | 683 | ProSiteProfiles | Protein kinase domain profile. | 379 | 676 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo10g00083 | 683 | SUPERFAMILY | L domain-like | 92 | 251 | - | - | |
Cmo10g00083 | 683 | SMART | serkin_6 | 379 | 676 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo10g00083 | 683 | SUPERFAMILY | Protein kinase-like (PK-like) | 379 | 670 | IPR011009 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00083 | Cmo11g00061 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g01703 | Cmo-Chr6:11731134 | Cmo10g00083 | Cmo-Chr10:371698 | 2.54E-55 | dispersed | |
Cmo10g00083 | Cmo-Chr10:371698 | Cmo02g01759 | Cmo-Chr2:10066921 | 3.41E-09 | dispersed | |
Cmo14g01437 | Cmo-Chr14:11695819 | Cmo10g00083 | Cmo-Chr10:371698 | 6.26E-58 | dispersed | |
Cmo10g00083 | Cmo-Chr10:371698 | Cmo11g00061 | Cmo-Chr11:290504 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74591 | PF00069 | Pkinase | 5.90E-42 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00083 | - | - | csv:101220500 | 1067.37 |