Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00092 ATGGATTGTGATCTCCTTGTTGCGTTGATTGGTCACCCAGCTTCCGTCGCTGGTTTCATTGTCCTCTTCATCTGGCTTTTGTTTTGTCAAAAATCTTCATCACAAGAAGAACAATCCTCGCCACCATCTCCACCAAGAAAGCTTCCAATTTTCGGACATCTTTTGAAGCTTGGCTCCCACCCTCATATCACTCTCCAGAGCTACGCCCGCCGCCATGGCCCTCTGTTTCTCCTCCACCTCGGCTCCAAGCCCACCATCGTGGTCTCTTCATCCGAAATAGCTCGTGATATCATGAAAACCCACGATCTTGTCTTTGCCAACCGACCCAAATCGAGTATGGCCGATAAGCTTCTTTACAACGCCAGCGACATATCAGCTGCTCCTTATGGCGAGTATTGGAGGCAGATGAGAAGCGTTGGCGTACTTCACCTTTTGAGTAACAAAAGGGTTCAATCCTTCCGCTCTGTGAGAGAAGAAGAGGTCAAATTAATGATCGAAAAGATCCAACGGAATCCAATATCGGTGAATTTGACTGAAACGTTCTCTGGACTAACCAACAACGTGGTTTGCAGAGTGGCTTTAGGAGCAAAATATGGAGTGGGAGAAGATTTGATTAATTTAAGGTCTCTTCTATTGGAATTTCTGGAATTGTTAGGGAGCTTTGGCGTTAGAGACTTCATTCCTTGGCTGGGTTGGATCGATGGTATCAGTGGGCTGGACGCCAGAGCAAAGCGCGTAGCCAAAGAGCTGGATGTTTTCCTAGGCAGAGTGATTCAAGATCATGTCGATTCGGAAAACAGAGACGAGAATTCTGGTAAGCACAAGGACCTGGTCGATGTTCTGCTTTGGATACAGAGAAACAACACCATTGGTTTCCCCCTTGAAATGGATAGCATAAAAGCTTTAATCTTGGACATGTTTTCAGCTGGCACAGACACAATCTCCACAGTATTGGAGTGGGCAATGTCAGAATTGTTGAAACACCCAGAAGCCATGAAGAAATTGAAGAGTGAGATTAGAGAAATATCAGGCGATCACTACGTGAACGAAGATGATCTAGACAAAATGCATTACTTGAAGGCAGTAATAAAAGAAACGTTGCGTCTACACCCACCAATCCCACTTCTTGTCCCGAGAGAATCGACCCAATACATAAAGCTAAGGGGCTACGATATTAAACCCAAGACCCGAGTTATGATCAATGCATGGGCCATTGGAAGAGACCCAGAAGTGTGGGAAGAAGCAGAGGAGTTTCGGCCAGAAAGGTTTATGAACAGTTCGATAGATTTCAAGGGTCAGGATTTTGAGTTGATCCCATTTGGCGCAGGGAGGAGAGGATGTCCTGGAGTTGAGTTTGCAACGGTGATAAATGAGATAGGTTTAGCCAATCTGGTGCATAAATTTGAATGGATGTTGCCAAATGGTGAGGATTTAGACATGACAGGGGCATTTGGGTTAACCATTCATAGGAAACATCCTCTTGTAGCCACAGCAACTCCTTGTTAG 1506 45.35 MDCDLLVALIGHPASVAGFIVLFIWLLFCQKSSSQEEQSSPPSPPRKLPIFGHLLKLGSHPHITLQSYARRHGPLFLLHLGSKPTIVVSSSEIARDIMKTHDLVFANRPKSSMADKLLYNASDISAAPYGEYWRQMRSVGVLHLLSNKRVQSFRSVREEEVKLMIEKIQRNPISVNLTETFSGLTNNVVCRVALGAKYGVGEDLINLRSLLLEFLELLGSFGVRDFIPWLGWIDGISGLDARAKRVAKELDVFLGRVIQDHVDSENRDENSGKHKDLVDVLLWIQRNNTIGFPLEMDSIKALILDMFSAGTDTISTVLEWAMSELLKHPEAMKKLKSEIREISGDHYVNEDDLDKMHYLKAVIKETLRLHPPIPLLVPRESTQYIKLRGYDIKPKTRVMINAWAIGRDPEVWEEAEEFRPERFMNSSIDFKGQDFELIPFGAGRRGCPGVEFATVINEIGLANLVHKFEWMLPNGEDLDMTGAFGLTIHRKHPLVATATPC 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 402352 403938 - CmoCh10G000920.1 Cmo10g00092 389438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00092 501 Gene3D Cytochrome P450 26 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 Pfam Cytochrome P450 42 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 SUPERFAMILY Cytochrome P450 41 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PANTHER CYTOCHROME P450 71B11-RELATED 21 499 - -
Cmo10g00092 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Cmo10g00092 501 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00092 501 PANTHER CYTOCHROME P450 71A21-RELATED 21 499 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00092 Cmo18g00165 CCT
Cmo10g00092 Cmo13g00794 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00092 Cmo-Chr10:402352 Cmo11g00066 Cmo-Chr11:310428 0 dispersed
Cmo10g00091 Cmo-Chr10:399381 Cmo10g00092 Cmo-Chr10:402352 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00092 - - csv:101203222 750.355