Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00095 ATGGAAGCTGGGTGTAGATTCTACTCTGCTACGGATGAGTTCAGATTGGAAGGCAAATGGTTGGTTGATCCCAAACATCTCTTCGTCGGACCTAGAATTGGAGAGGGAGCTCATGCCAAAGTTTACGAGGGCAAGTATAAGAACCAGACTGTTGCTATCAAAATTGTTCATAAAGGGGAAACAGCTGAAGAGGTTGTAAAGAAAGAAGCTCGGTTTGCTCGGGAGGTTGCAATGTTGTCTAAAGTGCAACATAAAAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACGGAGCTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTCAATATGCGTCCACGGTGCTTGGACACACGCGTGGCTGTTGGTTTTGCGCTTGATATTGCTCGTGCTATGGAATGCCTTCACTCCCATGGCATCATTCATCGTGATCTGAAACCTGAGAACCTTCTGTTGACTGCAGATCACAAGACAGTTAAATTAGCAGATTTTGGCTTGGCAAGAGAAGAGTCGTTGACGGAGATGATGACTGCGGAGACGGGGACCTACCGATGGATGGCTCCAGAGTTGTATAGCACTGTGACACTAAGGCAAGGGGAGAAAAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCAATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAGGCAGCATATGCCGCTGCTTTTAAGAATGTAAGGCCTAGCGCAGAGAATCTTCCTGAGGAACTGGCTATGGTTCTAACATCATGCTGGCAGGAGGATGCAAATGCTCGTCCTAATTTCTCCCAAATTATTCAAATGCTACTCAATTACCTTTACACTATTTCACCCCCCGAGCCGATGATTGCTTCCCGATTTTTCTCTTCTGAGAACACGGTGTTTCCTCCCGAGTCTCCCGGAACAAGTTCACTGATGGCAGTCCGTGATGATTCAGGGGACACTCCGAAAGCTAAAACGGAAAATAATCCCAGAGGTTGTTTCTCCTGCTCCTATGACTGTTTCTAA 1062 45.57 MEAGCRFYSATDEFRLEGKWLVDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETAEEVVKKEARFAREVAMLSKVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDTRVAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELAMVLTSCWQEDANARPNFSQIIQMLLNYLYTISPPEPMIASRFFSSENTVFPPESPGTSSLMAVRDDSGDTPKAKTENNPRGCFSCSYDCF 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 410087 412941 - CmoCh10G000950.1 Cmo10g00095 389441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00095 353 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00095 353 Pfam Protein tyrosine and serine/threonine kinase 31 287 IPR001245 GO:0004672|GO:0006468
Cmo10g00095 353 ProSitePatterns Protein kinases ATP-binding region signature. 33 54 IPR017441 GO:0005524
Cmo10g00095 353 ProSiteProfiles Protein kinase domain profile. 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00095 353 CDD STKc_MAP3K-like 33 287 - -
Cmo10g00095 353 Gene3D Transferase(Phosphotransferase) domain 1 108 298 - -
Cmo10g00095 353 Gene3D Phosphorylase Kinase; domain 1 15 106 - -
Cmo10g00095 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Cmo10g00095 353 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 328 - -
Cmo10g00095 353 MobiDBLite consensus disorder prediction 314 339 - -
Cmo10g00095 353 PANTHER SERINE-THREONINE PROTEIN KINASE 1 328 - -
Cmo10g00095 353 SUPERFAMILY Protein kinase-like (PK-like) 19 315 IPR011009 -
Cmo10g00095 353 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672|GO:0006468
Cmo10g00095 353 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672|GO:0006468
Cmo10g00095 353 PRINTS Tyrosine kinase catalytic domain signature 215 237 IPR001245 GO:0004672|GO:0006468
Cmo10g00095 353 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00184 Cmo-Chr6:1004284 Cmo10g00095 Cmo-Chr10:410087 4.01E-47 dispersed
Cmo06g00185 Cmo-Chr6:1005905 Cmo10g00095 Cmo-Chr10:410087 1.07E-19 dispersed
Cmo07g00502 Cmo-Chr7:2267677 Cmo10g00095 Cmo-Chr10:410087 3.26E-95 dispersed
Cmo10g00095 Cmo-Chr10:410087 Cmo14g00014 Cmo-Chr14:77131 1.29E-153 dispersed
Cmo10g00095 Cmo-Chr10:410087 Cmo11g01659 Cmo-Chr11:11780192 0 wgd
Cmo10g00095 Cmo-Chr10:410087 Cmo14g00693 Cmo-Chr14:3568346 0 wgd
Cmo10g00095 Cmo-Chr10:410087 Cmo04g02810 Cmo-Chr4:20168778 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74592 PF07714 PK_Tyr_Ser-Thr 1.80E-58 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00095 - - csv:101223021 684.871