Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00159 ATGGGACGTTCTCTGTTCGTTCGATCTCGGAGGCCATTACCAGCCTCCTCCATAACCAATCTCCTGAAACCTCTCCATTTTCACCCCTATTTCATCCCCCTCTGTTTCCCCAATCCATCATTGCTTCCTTCTAGTTATTCAATTGTTCCTTATTCAGAGGAAGCAGGTTTTCCGCCGCCTCCTTCCTCTTCCGCCATGGCCTTCTTTCCTCTTGCCGCTTTCCTTTGTGTAATTTTGCTCTCTGTTTCCTTCTCTGTTCGATCAGAGCTTTCTCTCGATTATTACCAGAAGACTTGCCCCGATTTTGCGAGAATCGTTCACGAGGCCGTCGTTCATAAGCAGACTGCTAGTCCAATCACCGCTGCCGCTACTATGCGCCTCTTCTTTAACGATTGTTTGGTTGGAGGTTGCGATGCTTCTGTTCTCATCTCCTCTAATGTCTTCAACCACGCCGAGCGCGAAGCCGAAATCAACCTCTCTCTTCCAGGAGACGCCTTCGACGTCGTCACTCGAGCGAAGATTACCTTGGAGCTTTCCTGCCCCGGGATCGTCTCTTGCTCCGACGTACTAGCACAGGCGACTCGTGATCTCATCGCCATCACAGGCGGACCGTCGTATGGCGTTCAATTAGGGCGAGAAGACAGTCACGTCTCGAAATCTTCAGACGTGGAAGGAAACATTCCGATTGCAAACCAAACAGTTGACGAGATGATCAAGCTATTCACAGGGAAAGGCTTCACGATTCAGGAAATGGTAGCGCTGTACGGCGGACGCACAATCGGATACTCAAATTGCAGGGAATTTGGCGACCGGCTCTTCAAGTTCAGCAAGACAACACCAACCGATCCAGAGCTTCATCCGAAGTTGGCGGAGGCTTTGAAAACGACTTGCACGGATTACGAGAAGAATCCTGGATTATCGGCATACAGCGACGCCGTAACGCCGTTGAAGTTCGACAACCAGTACTACCGGAACCTGCTGAGAGGATTGGCGCTTTCGAAGTCAGAACATGCATTGGCAAAGGATCCAAGGACGAAGAAGTTTGTGGAGATGTACGCGGGAAATCAGGACCTGTTCTTCAAGGACTTTGCAAAAGCTATGGAGAAGATGAGCGTTCGCGAGGTGAAAACTGGCGGGAAAGGAGAAGTGAGGAGGAGATGTGATGTGTTCAATTCAATCCGCACGAAAATATAA 1194 49.92 MGRSLFVRSRRPLPASSITNLLKPLHFHPYFIPLCFPNPSLLPSSYSIVPYSEEAGFPPPPSSSAMAFFPLAAFLCVILLSVSFSVRSELSLDYYQKTCPDFARIVHEAVVHKQTASPITAAATMRLFFNDCLVGGCDASVLISSNVFNHAEREAEINLSLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAITGGPSYGVQLGREDSHVSKSSDVEGNIPIANQTVDEMIKLFTGKGFTIQEMVALYGGRTIGYSNCREFGDRLFKFSKTTPTDPELHPKLAEALKTTCTDYEKNPGLSAYSDAVTPLKFDNQYYRNLLRGLALSKSEHALAKDPRTKKFVEMYAGNQDLFFKDFAKAMEKMSVREVKTGGKGEVRRRCDVFNSIRTKI 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 719459 720652 + CmoCh10G001590.1 Cmo10g00159 389505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00159 397 Gene3D - 93 391 - -
Cmo10g00159 397 SUPERFAMILY Heme-dependent peroxidases 89 391 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 ProSiteProfiles Plant heme peroxidase family profile. 89 391 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 CDD secretory_peroxidase 89 390 IPR033905 GO:0004601|GO:0042744
Cmo10g00159 397 Pfam Peroxidase 116 354 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Plant peroxidase signature 99 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Plant peroxidase signature 123 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Plant peroxidase signature 164 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Plant peroxidase signature 183 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Plant peroxidase signature 202 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Plant peroxidase signature 249 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Plant peroxidase signature 309 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Plant peroxidase signature 325 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Plant peroxidase signature 365 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 Gene3D Peroxidase, domain 2 228 370 - -
Cmo10g00159 397 PRINTS Haem peroxidase superfamily signature 121 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Haem peroxidase superfamily signature 184 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Haem peroxidase superfamily signature 202 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PRINTS Haem peroxidase superfamily signature 311 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00159 397 PANTHER PEROXIDASE 41 72 394 - -
Cmo10g00159 397 PANTHER - 72 394 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00159 Cmo-Chr10:719459 Cmo11g00197 Cmo-Chr11:964110 8.95E-134 dispersed
Cmo10g00159 Cmo-Chr10:719459 Cmo11g00119 Cmo-Chr11:619758 0 wgd
Cmo10g00159 Cmo-Chr10:719459 Cmo13g00930 Cmo-Chr13:8182766 5.13E-150 wgd
Cmo10g00159 Cmo-Chr10:719459 Cmo14g00639 Cmo-Chr14:3216333 2.14E-127 wgd
Cmo10g00159 Cmo-Chr10:719459 Cmo18g00116 Cmo-Chr18:820299 8.60E-155 wgd
Cmo10g00159 Cmo-Chr10:719459 Cmo04g02855 Cmo-Chr4:20358428 1.90E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00159 K00430 - csv:101213178 546.199