Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00172 ATGGAGCTTCAGAACACAGTGAAGGAAGCCCTAAACGCACTGTACCATCACCCTGACGATGCCTTCCGTATGCAGGCCGATCGGTGGCTTCAAGACTTCCAGCGCACTCTTGATGCCTGGCAGGTTGCTGATAATTTGCTTCACGAACCCACCAGCAATTTGGAAACTTTGATCTTTTGCTCTCAAACACTACGAAGCAAGGTACAGAGAGATTTTGAAGAGCTGCCTTCAGAAGCTTTTAGGCCCTTGCGTGACTCATTAAATAATTTATTAAGAAAATTTCACAAGGGCCCACCTAAAGTCCGAACTCAGATTAGCATAGCAGTGGCTGCATTAGCAGTACATGTTCCTGCTGATGATTGGGGAGAAGGTGGTATTGTAAATTGGCTCAGGAATGAGATGAACTCACATCCAGAGTATGTACCAGGATTTTTGGAGCTACTGACAGTTTTGCCTGAGGAAGTTTACAATTACAAGATCGCAGCTCGCCCGGATAGACGCCGTCAATTTGAAAAGGAACTCACATCCCAAATGGAAGTTACCCTTAATATCTTGACAGCTTGTTTGAATATTAATGAGCTGAAGGAGCAGGTGCTCGAGGCATTTTGTTCTTGGCTTCGATTAAAGCATGGGATCCCAGGATCTTTGCTTGCATCACATCCGTTAGTACTCACAGCTCTTGCAAGTTTAAATTCCGAGCTTCTCTCAGAGGCATCTGTAAACGTTATTTCTGAACTGATACACTATTCAGCAGCTGGAAGCTTAAGTGACCTCCCAGTGCACATGCCCTTAATTCAAGTAATTGTCCCTCAAGTTATGAATTTGAAGGCACAACTTAGAGATTCTTCAAAGGATGAAGAAGATGTGAAGGCCATTGCTCGGTTATTTGCTGACATGGGTGATTCATATGTTGAATTGATTGCAACTGGTTCTGATGAATCGATGTTAATAGTCCATGCCCTGCTAGAAGTTACTTCACACTCTGAATACGACATTGCCTCCATGACCTTTAACTTTTGGCATAGCCTTCAGTTGAACTTGACCAAAAGGGATGCATATATTTCTTTTGGCAATGATGCTTCCGTTGAGGCTGAGAGGAAAAGGAGGTTACAAATATTTTGTCCAGTTTATGAGTCACTCGTGTCCTTGGTTAGTTTCAGAGTCCAATACCCTAATGACTATCAAGACCTTTCTTATGAGGACCTCAAGGAGTTCAAGCAGACTAGATACGCTGTTGCAGATGTCTTAATTGACGCAGCATTGGTTTTAGGAGGTGATACGACTCTAAAACTTCTTTACGTGAAGCTTGTGGAGGCTGTTTCAAGCTGTGGAAATAGCGAACAAAGTGAATGGCGTCCAGCAGAGGCTGCTTTGTTTTGCATCCGAGCTATATCAAATTACGTTTCAGTTGGTGAGGCCGAAATAATGCCCCAGGTCATGGGTTTACTTCCAAAACTTCCAAAGCAAGCCCAACTACTCCAGACAGTGTGCTACACTGTTGGAGCATACTCGAAGTGGCTTGATGCATCACCAAGTGGGCAGTCTATACTACCTTCAGTAATTGATATCCTCATGAATGGAATGAGCACATCCGAGGATTCTGCAGCTGCTGCAGCCCTAGCATTTAGACATATTTGTGCTGATTGCCGGAGAAAGCTTTGTGGATTTTTGGATGGTCTCTTTCATATATATAATATGACGGTCAATGGAGAAAGTAGTTTGAAGGTGACTGCTGAGGACTCATTGCATCTAGTGGAAGCATTAAGCATGGTTATCACTGAACTTGTGCCCGATCAAGCTAAGAGAGCACTGGAGGCATTGTGCTTGCCTGTTGTCGCTCCTCTGCAGGAAATTGTCAATCAAGGCCTTGAAGTATTGAATAAGAAGCCTTCTAATGAGTTGACAGTCCATATTGATCGGTTTGCTTACATATTCAGATATGTAAATCACCCCGAAGCGGTTGCAGATGCAATACAGAGGCTTTGGCCACTTTTTAAAGCCATCTTCGACATCCGTGCTTGGGACATGCGGACAATGGAATCTCTTTGCCGATCGTGCAAATATGCTGTGAGAACTTCCGGTAGATTTATGGGAATAACAATTGGAGCGATGTTGGAAGAAATTCAAGGTCTATACAAGCAGCACCATCAGCCTTGCTTTCTTTATCTGTCTAGTGAAGTTATAAAGATTTTTGGTTCTGACCCATCTTGCGCAAGCTATCTCCAAAATTTGATTGAAGCACTATTCATGCACACAACACGTCTTCTCACAAATATTCAGGAATTTACTGCGAGGCCGGATATTGCCGATGACTGCTTTCTTCTAGCTTCAAGATGCATACGCTATTGCCCTCAACTATTTATTCCATCTTCAGTATTTCCAGCATTAATAGATTGTTCAATGGTCGGAATCACAGTACAGCACAGGGAAGCCTCAAATTCAATATTAACCTTCTTGGCTGATGTTTTCGATCTTGCAAATTCAAGCAAAAGTGAACAGTATATATCTAGAAGGGATGCAATTATTATACCTCGAGGTCCCGTTCTCCTTCGAATTTTGATTGCAGCCTTGACGGGGGCACTGCCAAGTTCTCGATTAGAGCCGGTGACATACACGCTATTAGCGTTAACTCGAGCTTATAGAGCGCAAGCGTTAGAATGGGCTAAGGAAAGTGTCTCATTGATTCCAGCAACGGCTGTTACTGAAAAAGAGCGGTCAAGATTTTTAAAAGCATTATCTGATGCAGCCTCAGGGTGCGACATAAATACGCTCGCTGTACCAATAGAAGAGCTATCAGACGTATGTCGACGAAATAGGAACGTTCAGGAGATAGTTCAAGGAGCTTTGAGGCCTCTTGAACTGAATTTTGCTGCCTTGAGGTGTAATGCCGGTTGGTTGGTTTTATTCTTTTCTTCATCTCCATCTTCTCCTTTTACCCTTATTTTTCATTCGGTATTCCCTTCGTTTCTCTCCCTCCTGATTTCATCTCTTTCTTCCTCCTCTTCTTCTTCCTTCTTCTCCGAGCCTGCACTCCAATTCTTTTTTTTTTTTTTTTCCCCTTGTTTTTCCTCCAACGCATTTGATCTTATTCATTCTCGATCTATCTCCTTTTTTTACGATGTGATTCTTAAGTTCTCAGCCCGCCCAGAAGAAATTCACGGCTGGCTTTGCAAATTTGTCGATCTTATTCGCCTTCTCAAGGGTTCCATTCCTCGATCGGATTCTCTAGCCACAATGGTGTCCGCATCGAACCGTCACAAAAACATGCACTCCCTTCTTGTGGCCAGTCTCACGAAGCTAACCATCCCTTCTTCGTCTCCTTCTTCTTCTCCTCCTCCTCCTTCATCCACAGCCGACTTCGATTTCTCCGACGTTTTTGGTCCCACAAATCCCTCCTCGTCATGTTTTCCGACGGACCCACAACACCACGAACAACAACCAGAGGTCATTCACAACAGATCTCACTCATTTGTGGGTCCATCTCCCCGGCTAACTCCTCCGTCTTCCCTTCCATTTTTCCGAGAAGTCGATCCACAGAGCGAGGAGGAGGATGAAGAAGATGACCTAGAAATCTCGACTCAAAATGGCGCTCAAGAGGAGATGAAGGGGGCGGATGAGAGTGAAAGTGGTGGTGGAGAGAAGACACAGGGGAAGATTGGAGTTGCGGATTTTGATATTCTTCGAGTGGTGGGAAAAGGGGCGTTTGGGAAGGTATTTTTGGTGAGGAAGAAAGGGGATTGTAAAGGAAATGGCTCTAATAATGATGGGATTTATGCTATGAAAGTGATGAGGAAGGATACCATCATAAAGAAGAATCATGTGGACTATATGAAGGCTGAGAGAGATATTCTCACAAAAGTTGCTCATCCTTTCATTGTTCAGCTCCGCTACTCTTTCCAGACCAAATCAAAACTGTACTTGATTCTTGATTTCATAAATGGAGGGCATCTCTTTTTCCATCTGTACAGGCAGGGAATCTTCAGTGAGGATCAGGCAAGGATCTATGCAGCCGAGATTGTATCGGCCGTTTCGCATCTTCACAGCTGTGGCATTGTGCACCGTGATCTGAAGCCGGAGAACATTCTTATGGATGCTGATGGGCATGTAGTGCTTACAGATTTTGGACTGGCCAAGGAAATTGAGATATCGAGCCGGTCTAATTCGATGTGTGGAACAACAGAGTATATGGCTCCAGAGATCTTGCTTTCTAAAGGTCACAACAAAGATGCTGATTGGTGGAGCGTTGGAGTCCTCTTGTATGAAATGCTTAGTGGCCAGCCACCGTTCACGCACGCTAATAGAAAGAAGCTTCAAGAAAGAATAATCAAAGAGAAAGTGAAGCTTCCACCATATCTGAGCACAGAAGCTCACTCTCTCCTCAGAGGGCTATTACAAAAGGAGCCTTCTACAAGATTAGGCAGCGGACCCAACGGAGGGGACGAGATAAAGAAACACAAATGGTTTCGACCGGTGAACTGGAAGAAACTGGAATGTAGGGAGCTGCAACCAAAGTTCAAACCGGATGTCAATGGAAATGACTGCACAGCAAATTTCGATCATTGTTGGACAGCAATGCCTCCAGACGACTCACCAGCTCCGACGCCAACCGATGGTGGACACTTCCAGGGATATTCTTCTCACTATACTGGTAAATGCAATTGTACATCAGTACACTATACTGCCATTAAATTATTGCTCATTCCACAGCTCAGTGACTTGCAATCCTTCAGATACTTTCAAATGCTGTGGACGATAAGACGAAGAGAACCCATACCACATATACAAATACACGGCCTCAGACACACAACACCCATAATGACCCATCACTGTGGATGTGGAGATCTTAGAGATTCCTTTCAAACGTTGACAAAAAAAAAATTAATGGAAGATACAGAAACAGGGGAATTTTGCCTCCTCCCCCGCTTCTTTCACAGTATCGCAACCACCCATTTTATCCAACTTGGATATTCCATCCTTCAAACTACAAGCATACCCACAAGAGACCAGACCCACCAAAATACAGTCATTTCTAACAGAGAACAGTGTCATTATTCAGTCAGTATCAGCTACCGACAAGAACAGCAAATCATCAAGAATCTAGATAACATAGATGCCATCAAAAACATGGAGCAACCCCCTTTTTCCGGGTCTGCACTGGATAGGATCAGATTCAGTCACCTAATAACTTCTGTCGTCTATAGCCACGTTCCCTCTAATTGTCAATAA 5226 43.86 MELQNTVKEALNALYHHPDDAFRMQADRWLQDFQRTLDAWQVADNLLHEPTSNLETLIFCSQTLRSKVQRDFEELPSEAFRPLRDSLNNLLRKFHKGPPKVRTQISIAVAALAVHVPADDWGEGGIVNWLRNEMNSHPEYVPGFLELLTVLPEEVYNYKIAARPDRRRQFEKELTSQMEVTLNILTACLNINELKEQVLEAFCSWLRLKHGIPGSLLASHPLVLTALASLNSELLSEASVNVISELIHYSAAGSLSDLPVHMPLIQVIVPQVMNLKAQLRDSSKDEEDVKAIARLFADMGDSYVELIATGSDESMLIVHALLEVTSHSEYDIASMTFNFWHSLQLNLTKRDAYISFGNDASVEAERKRRLQIFCPVYESLVSLVSFRVQYPNDYQDLSYEDLKEFKQTRYAVADVLIDAALVLGGDTTLKLLYVKLVEAVSSCGNSEQSEWRPAEAALFCIRAISNYVSVGEAEIMPQVMGLLPKLPKQAQLLQTVCYTVGAYSKWLDASPSGQSILPSVIDILMNGMSTSEDSAAAAALAFRHICADCRRKLCGFLDGLFHIYNMTVNGESSLKVTAEDSLHLVEALSMVITELVPDQAKRALEALCLPVVAPLQEIVNQGLEVLNKKPSNELTVHIDRFAYIFRYVNHPEAVADAIQRLWPLFKAIFDIRAWDMRTMESLCRSCKYAVRTSGRFMGITIGAMLEEIQGLYKQHHQPCFLYLSSEVIKIFGSDPSCASYLQNLIEALFMHTTRLLTNIQEFTARPDIADDCFLLASRCIRYCPQLFIPSSVFPALIDCSMVGITVQHREASNSILTFLADVFDLANSSKSEQYISRRDAIIIPRGPVLLRILIAALTGALPSSRLEPVTYTLLALTRAYRAQALEWAKESVSLIPATAVTEKERSRFLKALSDAASGCDINTLAVPIEELSDVCRRNRNVQEIVQGALRPLELNFAALRCNAGWLVLFFSSSPSSPFTLIFHSVFPSFLSLLISSLSSSSSSSFFSEPALQFFFFFFSPCFSSNAFDLIHSRSISFFYDVILKFSARPEEIHGWLCKFVDLIRLLKGSIPRSDSLATMVSASNRHKNMHSLLVASLTKLTIPSSSPSSSPPPPSSTADFDFSDVFGPTNPSSSCFPTDPQHHEQQPEVIHNRSHSFVGPSPRLTPPSSLPFFREVDPQSEEEDEEDDLEISTQNGAQEEMKGADESESGGGEKTQGKIGVADFDILRVVGKGAFGKVFLVRKKGDCKGNGSNNDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVAHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYAAEIVSAVSHLHSCGIVHRDLKPENILMDADGHVVLTDFGLAKEIEISSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLSGQPPFTHANRKKLQERIIKEKVKLPPYLSTEAHSLLRGLLQKEPSTRLGSGPNGGDEIKKHKWFRPVNWKKLECRELQPKFKPDVNGNDCTANFDHCWTAMPPDDSPAPTPTDGGHFQGYSSHYTGKCNCTSVHYTAIKLLLIPQLSDLQSFRYFQMLWTIRRREPIPHIQIHGLRHTTPIMTHHCGCGDLRDSFQTLTKKKLMEDTETGEFCLLPRFFHSIATTHFIQLGYSILQTTSIPTRDQTHQNTVISNREQCHYSVSISYRQEQQIIKNLDNIDAIKNMEQPPFSGSALDRIRFSHLITSVVYSHVPSNCQ 1741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 774296 795638 - CmoCh10G001720.1 Cmo10g00172 389518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00172 1741 Gene3D Transferase(Phosphotransferase) domain 1 1312 1507 - -
Cmo10g00172 1741 ProSitePatterns Protein kinases ATP-binding region signature. 1230 1261 IPR017441 GO:0005524
Cmo10g00172 1741 ProSiteProfiles Protein kinase domain profile. 1224 1488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00172 1741 Pfam Exportin 1-like protein 98 243 IPR013598 -
Cmo10g00172 1741 CDD STKc_AGC 1230 1488 IPR045270 GO:0004674|GO:0005524
Cmo10g00172 1741 Gene3D Phosphorylase Kinase; domain 1 1222 1530 - -
Cmo10g00172 1741 SMART pkinase_C_6 1489 1548 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cmo10g00172 1741 MobiDBLite consensus disorder prediction 1103 1216 - -
Cmo10g00172 1741 ProSiteProfiles AGC-kinase C-terminal domain profile. 1489 1556 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cmo10g00172 1741 SUPERFAMILY ARM repeat 1 1188 IPR016024 -
Cmo10g00172 1741 SUPERFAMILY Protein kinase-like (PK-like) 1223 1549 IPR011009 -
Cmo10g00172 1741 Gene3D - 2 932 IPR011989 -
Cmo10g00172 1741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1351 1363 IPR008271 GO:0004672|GO:0006468
Cmo10g00172 1741 SMART serkin_6 1224 1488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00172 1741 MobiDBLite consensus disorder prediction 1122 1141 - -
Cmo10g00172 1741 MobiDBLite consensus disorder prediction 1178 1193 - -
Cmo10g00172 1741 PANTHER TRANSPORTIN 3 AND IMPORTIN 13 3 956 - -
Cmo10g00172 1741 Pfam Protein kinase domain 1225 1488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00172 1741 PANTHER TRANSPORTIN MOS14 3 956 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00172 Cmo-Chr10:774296 Cmo15g01451 Cmo-Chr15:9842541 2.04E-64 dispersed
Cmo18g00930 Cmo-Chr18:10466107 Cmo10g00172 Cmo-Chr10:774296 6.26E-57 dispersed
Cmo11g00132 Cmo-Chr11:660666 Cmo10g00172 Cmo-Chr10:774296 0 transposed
Cmo14g00800 Cmo-Chr14:4119964 Cmo10g00172 Cmo-Chr10:774296 2.15E-21 transposed
Cmo10g00172 Cmo-Chr10:774296 Cmo11g00131 Cmo-Chr11:656883 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74596 PF00069 Pkinase 6.60E-70 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00172 K15436 - csv:101215103 1791.93