Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00183 ATGGAAGCTTCGGGGTTTATGGCCAGTAAATGGATTGCAACGGCGTTTGCGATTTGGATCCAATGCAGCTGCGGGGCCGCCACCTTCAGCATCTACTCTTCGGCTCTCAAGTCCTCACAGGGCTACGACCAATCCACCCTTGGCACCGTTTCCGTTTTCAAGGACATCGGTACCAACGCCGGCATCATTTCTGGCTTTCTTTGCTCCGCCGTCACTTCCCCCTTCCCCCGCCGACCCTTTGTTGGGCCATGGATGGTGTACGCGGCGGGAGCGGTTCAGTGCTTCCTCGGATATATTTTCATGTGGGCCGCTGTCTCCGGACTGATCGATCGGCCGTCGGTTCCAGTGATGTGCTTCTTCATGTTGCTTGCTTCACATGCGCAAACGTTTTTCAGTACGGCGAATGTGGTAACTGGCGTGCACAATTTCAAGCACTATAGCGGCACGATTGTGGGCATCATGAAGGGATATCTTGGTCTAAGTGGAGCACTGGTAATCCAAGTTTATAACACGATTTGCAATGGAGAACCAAGCAATTTTCTCCTCTTGCTGGCGGTTTTGCCCACACTTCTTTCCATCATGTTCATGTGGTTTATCAGAATTGACAGAACAGAGTCCAGAAACGAGAGGAAGCATTTGGACTCATTATCTGCACATGCCGTGATAGTTGCTTTTTACCTAATGGCTGTCATCATTTTAGACAACACTTTCTCCCTTCCATCATCGACTCGTTCCTTCACATTCTCCATACTCCTAATTCTTCTTTCTGCTCCTCTTGGAATCGCCATTAATGCTCGGAGGGAGGACTTAAAAGTGACTGAAAAAACCCATGTTCTTAACAAATCTAAGTCAGTGGATACAGAGGATCTTGTTGAGTATCACGAGTTGCCCAGGGACGAGCGCCAGATAATGGCTGTTGCAAGCTCTAGTACCCCACAAGCCATGAATGTCTTGGAAGCTTTATGCACTATAAACTTCTGGCTGTTGTTTACAGCCATGGTGTGTGGAATGGGTTCTGGATTAGCCACAATAAACAACATGACACAGCTTGGCCAGTCTCTTGGCTACACAGTAACAGAGACGAAGACATTTGTTTCCTTATGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGCTACGCCTCTGATTATCTTCTCCACTCATACGGCTGTGCCAGGCCATTGTTAATGGCAATCACTCTACTCATAATGAGCGGTGGGCACCTCGTGATCGCCTCAAGTTTCTCTGGAAATCTTTACGTGGGTTCAACTCTTGTTGGCATATGCTACGGCTCACAGTGGTCGCTCATGCCCTCAATTACTTCGGACATATTTGGGTTAGAGCATATGGGAACTATTTTCAACGCCATAGCCACAGCCAGCCCTCTGGGGTCGTACGTTTTTTCTGTTAAAGTGATCGGTTACATCTACGACAGGGAAGCTGCCGGAGAACATGGGTCCTGCTCTGGCACACACTGTTTTGCGGTGTCTTTTCTAGTCATGGCCGTCGTGGCTTTCGTGGGATTTCTGGTAGCTGCTGCTCTCTTCTTTCGAACCAGGAGATTTTACGCTTTGCAAAGTAGAGCCGAACGTCTCAGTTGA 1605 48.47 MEASGFMASKWIATAFAIWIQCSCGAATFSIYSSALKSSQGYDQSTLGTVSVFKDIGTNAGIISGFLCSAVTSPFPRRPFVGPWMVYAAGAVQCFLGYIFMWAAVSGLIDRPSVPVMCFFMLLASHAQTFFSTANVVTGVHNFKHYSGTIVGIMKGYLGLSGALVIQVYNTICNGEPSNFLLLLAVLPTLLSIMFMWFIRIDRTESRNERKHLDSLSAHAVIVAFYLMAVIILDNTFSLPSSTRSFTFSILLILLSAPLGIAINARREDLKVTEKTHVLNKSKSVDTEDLVEYHELPRDERQIMAVASSSTPQAMNVLEALCTINFWLLFTAMVCGMGSGLATINNMTQLGQSLGYTVTETKTFVSLWSIWNFLGRFGAGYASDYLLHSYGCARPLLMAITLLIMSGGHLVIASSFSGNLYVGSTLVGICYGSQWSLMPSITSDIFGLEHMGTIFNAIATASPLGSYVFSVKVIGYIYDREAAGEHGSCSGTHCFAVSFLVMAVVAFVGFLVAAALFFRTRRFYALQSRAERLS 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 832059 834486 - CmoCh10G001830.1 Cmo10g00183 389529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00183 534 Pfam Nodulin-like 10 262 IPR010658 -
Cmo10g00183 534 CDD MFS_Mch1p_like 9 509 - -
Cmo10g00183 534 Pfam Major Facilitator Superfamily 328 531 IPR011701 GO:0022857|GO:0055085
Cmo10g00183 534 Gene3D MFS general substrate transporter like domains 290 532 IPR036259 -
Cmo10g00183 534 PANTHER F25A4.25 PROTEIN 7 527 - -
Cmo10g00183 534 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 527 - -
Cmo10g00183 534 SUPERFAMILY MFS general substrate transporter 13 523 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00183 Cmo11g00140 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00183 Cmo-Chr10:832059 Cmo11g00141 Cmo-Chr11:708639 0 dispersed
Cmo10g00183 Cmo-Chr10:832059 Cmo11g00139 Cmo-Chr11:703049 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00183 - - csv:101216789 831.247