Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00189 | ATGGAAGAAAAGGGCGAGAAACCTGAGGTTTTGGAGGCTGTGTTGAAGGAAACTGTGGACTTGGAAAACATACCCATCGAGGAGGTTTTTGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCACAGCGGCTGCTGAGGAACGGCTTGTAATTTTTGGTCACAACAAGCTTGAGGAGAAGAAGGAAAGTAAATTCTTGAAGTTTTTGGGGTTTATGTGGAATCCCCTCTCATGGGTTATGGAAGCTGCTGCTATTATGGCTATTGCACTCGCAAATGGTGGAGGAAAGCCTCCTGACTGGCAAGATTTTGTTGGTATTGTCGCCCTGTTGCTTATCAACTCAACAATTAGTTTTATTGAGGAAAACAATGCCGGTAACGCTGCAGCTGCTCTAATGGCTAGCTTAGCTCCCCAAGCCAAGATTCTTCGAGATGGAAGGTGGAGTGTGCAAGATGCTTCGGTTTTAGTTCCTGGTGATATTATAAGTATCAAACTTGGGGATATAATTCCAGCTGATGCTCGTCTTCTAGAAGGGGATCCATTGAAAATTGATCAGTCTGCTCTTACAGGCGAGTCTCTTCCTGTTACGAAAGGTCCGGGTGATGGCATATATTCTGGTTCTACTTGTAAACAGGGAGAGATTGAAGCGGTAGTCATTGCCACTGGTGTTCATACTTTCTTCGGCAAAGCAGCTCACCTCGTTGACACCACTAATCAAGTGGGACACTTCCAGAAGGTCTTAACTGCAATCGGGAACTTCTGCATATGTTCAATTGCTTTGGGGATGATTACAGAAATTATTGTCATGTACCCAATTCAAGATCGTGAATATCGTCCTGGAATTGACAATCTTCTCGTGCTTCTGATTGGAGGAATTCCAATTGCCATGCCCACAGTCCTCTCTGTGACCATGGCTATTGGCTCTCATAGGTTATCTCAGCAGGGTGCTATCACAAAGAGGATGACTGCAATTGAAGAGATGGCAGGTATGGATGTGCTTTGCAGTGATAAGACTGGAACACTTACATTAAACAAGCTAACTGTCGACAAAAATCTTGTTGAGGTTTTTGCTAAAGGAGTGGATGTGGATACTGTGGTTCTAATGGCAGCCCGGGCATCAAGAATGGAGAATCAAGATGCTATTGATACTGCTATTGTTGGGATGCTTGCTGACCCAAAAGAGGCTCGTGCCAGTATTCAAGAAGTACACTTCCTTCCATTTAACCCTACTGATAAGCGGACTGCATTGACTTACATAGACCATGAGGGTAAAATGCATAGAGTCAGCAAAGGTGCACCAGAGCAGATTTTGAACCTAGCGCACAATAAGTCGGAGATTGAGCGCAAAGTTCATGCTGTGATAGACAAGTTTGCAGAACGAGGTTTACGCTCTCTAGCTGTCGCATACCAGGAAGTTCCAGATGGTAGGAAGGAGAGTGCTGGAGGTCCATGGCAGTTTGTTGGCCTTCTGCCACTGTTTGACCCACCAAGGCATGATAGTGCAGAGACAATAAGGAGGGCCTTAAACCTCGGAGTGAATGTGAAGATGATTACTGGTGACCAGCTGGCTATTGGAAAGGAAACAGGACGTCGCTTGGGGATGGGAACCAACATGTATCCTTCATCTGCTTTATTAGGTCAGGACAAGGATGAGTCTATTGCTGCTTTACCTGTTGATGAACTGATAGAAAAAGCTGATGGCTTTGCTGGTGTTTTTCCTGAGCACAAATATGAGATTGTAAAGCGCCTGCAGGCTAGGAAACATATCTGTGGAATGACTGGCGATGGGGTAAATGATGCTCCCGCCCTTAAAAAAGCAGACATAGGCATTGCTGTTGCTGATGCCACCGATGCTGCTCGTAGTGCTTCAGACATAGTCCTCACAGAGCCTGGTTTGAGTGTTATCATTAGTGCTGTTTTGACCAGCCGAGCAATCTTTCAGAGGATGAAAAATTACACTATATATGCAGTTTCAATCACTATTCGTATAGTGCTTGGTTTCATGTTGCTGGCTCTCATATGGAAATTTGACTTTCCACCTTTTATGGTGCTCATCATTGCCATTCTCAATGATGGTACAATAATGACGATATCTAAGGACAGAGTGAAACCATCTCCTTTGCCTGATAGCTGGAAGCTTGCGGAAATTTTTACAACTGGCATTATACTTGGCGGCTACATGGCAATGATGACTGTTATCTTCTTTTGGGCAGCCTATAAGACCGACTTTTTTCCACGAATCTTTGGGGTGGCAACTCTTGAGAAAACTGCTCACGATGACATTAGGAAACTTGCCTCAGCTATTTATCTGCAAGTAAGCACTATAAGTCAGGCTCTTATATTTGTTACACGCTCTCGAAGTTGGTCTTATGTGGAGCGTCCTGGACTATTACTGGTTGCGGCTTTTCTGGTTGCACAGCTGATTGCTACTTTAATTGCTGTTTATGCAAACTGGAGCTTTGCTGCCATTGAAGGAATTGGATGGGGTTGGGCTGGTGTAATCTGGCTTTACAATATCATCTTTTACATCCCACTTGATCTCATTAAGTTCTTTATACGATATGTTTTGAGTGGGAGGGCTTGGGACCTTGTTATTGAACAAAGAATTGCCTTTACGAGGCAAAAGGACTTCGGGAAGGAACAACGGGAGCTCCAATGGGCTCATGCTCAAAGAACACTACATGGATTGCAAGCACCTGATGCCAAGATGTTCCATGACCGGACCCATTTCACTGAGCTCAATCAGATGGCTGAAGAAGCCAAAAGGAGAGCAGAAATTGCAAGGTTGAGGGAACTACACACCCTGAAAGGCCATGTTGAATCAGTGGTGAGGCTGAAAGGACTTGACATTGATACAATTCAGCAAGCTTACACAGTGTGA | 2880 | 44.48 | MEEKGEKPEVLEAVLKETVDLENIPIEEVFENLRCSKEGLTTAAAEERLVIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVALLLINSTISFIEENNAGNAAAALMASLAPQAKILRDGRWSVQDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIALGMITEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRMENQDAIDTAIVGMLADPKEARASIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEIERKVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIILGGYMAMMTVIFFWAAYKTDFFPRIFGVATLEKTAHDDIRKLASAIYLQVSTISQALIFVTRSRSWSYVERPGLLLVAAFLVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDLIKFFIRYVLSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFHDRTHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV | 959 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 861870 | 867896 | + | CmoCh10G001890.1 | Cmo10g00189 | 389535 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00189 | 959 | Gene3D | - | 99 | 824 | - | - | |
Cmo10g00189 | 959 | PANTHER | PLASMA MEMBRANE ATPASE 1 | 6 | 939 | - | - | |
Cmo10g00189 | 959 | Coils | Coil | 910 | 930 | - | - | |
Cmo10g00189 | 959 | Pfam | Cation transporter/ATPase, N-terminus | 23 | 86 | IPR004014 | - | |
Cmo10g00189 | 959 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 6 | 939 | - | - | |
Cmo10g00189 | 959 | Gene3D | - | 137 | 221 | - | - | |
Cmo10g00189 | 959 | SUPERFAMILY | HAD-like | 330 | 640 | IPR036412 | - | |
Cmo10g00189 | 959 | SMART | Cation_ATPase_N_a_2 | 20 | 92 | IPR004014 | - | |
Cmo10g00189 | 959 | PRINTS | H+-transporting ATPase (proton pump) signature | 450 | 468 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo10g00189 | 959 | PRINTS | H+-transporting ATPase (proton pump) signature | 565 | 581 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo10g00189 | 959 | PRINTS | H+-transporting ATPase (proton pump) signature | 593 | 609 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo10g00189 | 959 | PRINTS | H+-transporting ATPase (proton pump) signature | 624 | 649 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo10g00189 | 959 | PRINTS | H+-transporting ATPase (proton pump) signature | 769 | 790 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo10g00189 | 959 | Pfam | haloacid dehalogenase-like hydrolase | 330 | 607 | - | - | |
Cmo10g00189 | 959 | Gene3D | - | 331 | 630 | IPR023214 | - | |
Cmo10g00189 | 959 | Gene3D | - | 908 | 959 | - | - | |
Cmo10g00189 | 959 | Gene3D | - | 346 | 493 | IPR023299 | GO:0000166 | |
Cmo10g00189 | 959 | PRINTS | P-type cation-transporting ATPase superfamily signature | 184 | 198 | - | - | |
Cmo10g00189 | 959 | PRINTS | P-type cation-transporting ATPase superfamily signature | 334 | 348 | - | - | |
Cmo10g00189 | 959 | PRINTS | P-type cation-transporting ATPase superfamily signature | 488 | 499 | - | - | |
Cmo10g00189 | 959 | PRINTS | P-type cation-transporting ATPase superfamily signature | 510 | 520 | - | - | |
Cmo10g00189 | 959 | PRINTS | P-type cation-transporting ATPase superfamily signature | 593 | 612 | - | - | |
Cmo10g00189 | 959 | PRINTS | P-type cation-transporting ATPase superfamily signature | 616 | 628 | - | - | |
Cmo10g00189 | 959 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 336 | 342 | IPR018303 | - | |
Cmo10g00189 | 959 | SFLD | Haloacid Dehalogenase | 316 | 644 | - | - | |
Cmo10g00189 | 959 | SUPERFAMILY | Calcium ATPase, transduction domain A | 137 | 234 | IPR008250 | - | |
Cmo10g00189 | 959 | Pfam | E1-E2 ATPase | 135 | 313 | - | - | |
Cmo10g00189 | 959 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 568 | 681 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo10g00189 | 959 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 106 | 352 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo10g00189 | 959 | SFLD | p-type atpase | 316 | 644 | IPR044492 | - | |
Cmo10g00189 | 959 | CDD | P-type_ATPase_H | 39 | 850 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cmo10g00189 | 959 | TIGRFAM | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 39 | 815 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cmo10g00189 | 959 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 20 | 856 | IPR023298 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00189 | Cmo13g00952 | CCT | |
Cmo10g00189 | Cmo18g00101 | CCT | |
Cmo10g00189 | Cmo18g00101 | ECH | |
Cmo10g00189 | Cmo13g00952 | ECH | |
Cmo10g00189 | Cmo11g00144 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g02878 | Cmo-Chr4:20497410 | Cmo10g00189 | Cmo-Chr10:861870 | 0 | dispersed | |
Cmo10g00189 | Cmo-Chr10:861870 | Cmo12g00243 | Cmo-Chr12:1590880 | 0 | dispersed | |
Cmo10g00189 | Cmo-Chr10:861870 | Cmo11g00144 | Cmo-Chr11:724695 | 0 | wgd | |
Cmo10g00189 | Cmo-Chr10:861870 | Cmo13g00952 | Cmo-Chr13:8289327 | 0 | wgd | |
Cmo10g00189 | Cmo-Chr10:861870 | Cmo18g00101 | Cmo-Chr18:691667 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00189 | K01535 | - | csv:101217264 | 1793.86 |