Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00213 ATGGCCACCGTCACTACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCGAGATTCCTTACTGGTTCTTCCGGCAAACTCCACCGTATGCTGTCGGTTAAACCAGTCACTGCTTCGTCTTCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAGTGGTTGCCTGGTCTGCCATCTCCGGCATACTTAAATGGCAGTCTTCCAGGGGACAATGGATTTGACCCACTGTCTCTAGCCGAGGACCCAGAGAACTTGAAGTGGTTCGTGCAAGCGGAGCTGGTGAACGGCCGGTGGGCTATGCTGGGTGTCGCCGGAATGCTTCTTCCGGAGGTTTTCACGAAGATCGGAATCATCAACGCTCCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCATCGTCTTCGACTCTGTTCGTGATCGAGTTCATCCTTTTCCATTACGTGGAAATCCGAAGGTGGCAGGACATCAAGAACCCCGGCAGCGTGAACCAAGACCCCATCTTCAAGCAATACAGTTTGCCCCCAAATGAAGTGGGTTACCCCGGTGGGATTTTCAACCCCCTCAATTTCGCTCCCACTCAGGAAGCCAAAGAGAAGGAACTAGCCAATGGGAGGCTTGCGATGTTGGCGTTTTTGGGGTTCATTGTGCAACACAACGTGACAGGGAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTGCAGACGTTCAGTGGCAACTAA 759 53.1 MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 948889 950839 - CmoCh10G002130.1 Cmo10g00213 389559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00213 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 252 IPR001344 GO:0009765|GO:0016020
Cmo10g00213 252 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 252 - -
Cmo10g00213 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Cmo10g00213 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Cmo10g00213 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00213 Cmo11g00172 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01932 Cmo-Chr4:9872268 Cmo10g00213 Cmo-Chr10:948889 1.59E-76 dispersed
Cmo04g02705 Cmo-Chr4:19663172 Cmo10g00213 Cmo-Chr10:948889 5.39E-51 dispersed
Cmo10g00213 Cmo-Chr10:948889 Cmo11g00756 Cmo-Chr11:3676214 7.51E-61 dispersed
Cmo11g00916 Cmo-Chr11:4728050 Cmo10g00213 Cmo-Chr10:948889 9.22E-47 dispersed
Cmo01g00834 Cmo-Chr1:4452811 Cmo10g00213 Cmo-Chr10:948889 9.33E-162 wgd
Cmo10g00213 Cmo-Chr10:948889 Cmo11g00172 Cmo-Chr11:834931 2.80E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00213 K08910 - csv:101222701 479.174