Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00227 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAAATCTCCGAGAGAGTCTATGTGTTTGATTGCTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTGCAAGGCCACTTTCCCGATGCCTCTTTCATGGTTTTCAACTTCAGAGAAGGTGATAGGCGTAGTCAAATTTCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTACTGTCATTGGAGATGGTTCACCACTTCCTTCGATCTAGTGAAAGCTGGTTGTCGGTGGAGGGTCAACAGAATGTTCTATTGATGCACTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTCTTGTATAGAAAACAATACAGTGGGGAGCAGAAGACCCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTCCTTTAAATCCTCAGCCTTCCCATCTGAGATATCTTCAATACATTTCCAGGAGAAATTTAGGTTCTGATTGGCCTCCATCGGATACACCTCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCTCTTTTTGACGGGGGGAAGGGATGTCGGCCTGTTGTGCGTGTTTATGGTCAAGACCCCTCAACACCAGCAAATAGAACTTCAAGGCTTTTATTTTCAACATCAATCAAAAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTCCAAGGAGACGTAGTTCTTGAATGCATCCATTTGGATGAAGATCTAGTGCACGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTCGTAAGATCAAACATTATGATGCTGAACCGTGACGAAGTTGATGTTTTATGGGATGCAAGGGACCAATTTCCTAAGGACTTCAGAGTTGAGGCACTCTTTTTGGATGCTGATGCTGTTGTCCCCAGTCTCACCACAGCCTTAGACGATGAAGATGGTAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATCTTCAGTAATACAATGGATGGGCAGGAAGCAAAGGGGTCCAATGATCCTCAAGTGGTCAAGCATGTAAACCGGAACGAAGATTTGAAGGAGGACTTGGATCCTCATGCATTCCAAGATTGTGCATCTGACGATGGAAATCATCTTAGGCATGATAAGAAATCAGATTTTGATGCAGTGAAGGACATTACTGTGGATGATGTGAGGTACAAACTGGATGAAAATATATATCCTGATCTTAATGTAGTTAAGGACATTGGTGTAGATGATGGGGATATGAATTCAAATTCCTTCATGGTTGCTGCTAATGTCCTGACCCATGTGGAAGCCCAGGGTTTGGTGGATGATGCATACGAGAAATTTGAAGATATAGAAGAAAAGGATGATGGTAGATATACTACAACTGAGAAATTGGAAAACAAGGCTCTGCAGAAAAAGTTGAGTGCTGATGGTTCAGAATCTGAAAAATTGCAAATACCGATTTCCAAGAAACAGCCTATTTCAAGTGCAAAACCGACCACTGATATGGGTTTAACTGAACAGAAAGTCGAACAACAAGAGGCTCAAGGGTTTTCTGGAAAACAAGCAAGGCCAAATATAGTTTCTAGGTGGATCCCACCTAACAAAGGCTCCTATATGAATTCTGTGCATGTTTCCTATCCGCCTTCAAGATATAACAGTGCCCCTGCTGCCACTCTCAGTTCCCTAGTTGCTACAGATGTGAATAATGACGTGGACTCTATAAGGCCTTCATACTCTGCACTTGGGGAACTCGTGCTTGGCCCATCGTCTCCAGTTGAGTCGATAGAGGAGACATATTCTTCCTCTGAAACTTTAAAACCATCACACTGCGATCCACAACTTGAAGTACCTCCTCCCCCACTGCCCACAAAGCCTCCATCTCCATATTTTCCATCACCCCCCCGAGCAAATGCAATACCTCCTCCACCACCTCCACCACCTCCACCACCTACTTCATTTCATCATATTGAGTCAACGTACTCTCCTCCACCACTTTCTGTGTCTTCAGCACCACCACCCCTAGTTAGCTCATCAAAGACTGTGATTACCCCTTCCCCTCCCCCTCCCCCTCCATTCAGTAGGCAGAATAGTGTTTTTTCCCATTCTTCTACACAACCATCATGGGAGCAAATATATTCTTCCGTTTCTAATGCAATGGTGGCTGGTTCTATACCGCCTCCCCCTCCACCACCCCCACCACCACCTCTCTCCTCTCTCTCTCTGGTTAGGCCATATACATCAAAGAATATTGCAAGTACTCCTCCAGCACCTGTTTTATCCCCTCCCCCACCTTCTGTGATGCATGAAACACTTGCTTCACCACCTCCACCATCCTCACCTGCTTCATATGGTGATAAAGCATCACCAACTCTAGCATCTCCAGCACCCTCCCCTATTACTTCAGTTCATGGTGCTTCTCCACCCCCGCCCCCAACACCTCCACTTATTACTTCAGTTCATGGACCACCACCTCCTTCGATGCATGGGGCTTTTCCACCATTGCCTCCTCCACCACCTCCGCCTCCACCAATCCATGGGACTCCGTCACCATCACCACCCCCACCACCACCGCCTCCACCAATGCACGGGGCTCCTCCCCCACCACCACTTCCTCCACCAATGCATGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCTCCACCAATGCACGGGGCTCCTCCTCCACCACCACCACCACCTCCACCAATGCATGGGGCTCCTCCACCCCCGCCACCACCTCCTCCTATGTATGGGGCTCCTCCCCCACCACCACCTCCTCCTATGTATGGGGCTCCTCCCCCACCACCACCTCCTCCAATGCATGGGGCCCCTCCCCCGCCGCCGCCACCACCTGGTGGAGGGAGAGCCCCTCCCCCACCGCCACCACCACCCGCCCCTCCACCGCCTCCCCCACCCGGTGGTGGGAGAGCCCCACCACCACCTCCCCCACCGGGTGGTGGTGGAGCCCCAGCACCCCCTCCCCCTCCGGGAGGTCGTGGAGCCCCACCCCCTCCTAGACCTCCTGGTGGTGGTGGACCTCCTCCACCTCCACCACTAGGTGCAAGAGGAGCAAACGCTCCACCTGACCCTAGAGGTTTGTCCTCTGGAAGAGGGCGTGGGCTATCACGCTCAACAGCTACAGCACCTCGAAGGTCCTCCTTAAAGCCCCTACATTGGAGCAAAGTAACGAGAGTTCTGCAAGGGAGCCTGTGGGAAGAACTGCAGAGATATGGAGAACCTCAAATTGCACCAGAGTTTGATGTGTCTGAGTTAGAGAGCCTCTTTTCTGCAAATGTTCCCAAACCAGCTGATGGAGGTAAATCTGGAGGGCGAAGGAAGTCTGTTGGATCCAAAAGTGACAAAGTTCACCTGATTGACCTCAGAAGAGCTAATAACACTGAAATTATGCTCACCAAAGTAAAGATGCCTCTTCCTGATATGATGGCTGCAGTGCTAGCTATGGACGAGTCAGTATTAGATGTTGATCAGGTGGAAAATCTCATAAAATTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATAAGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTAGAGTCAAAGTTGAGAGTGTTTTCCTTTAAGATTCAGTTCGGCTCTCAGATATCAGAATTTAAGAAGAGTTTAAATACTGTCAACTCTGCATGTGTCGAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACACTGAATCAAGGAACAGCAAGGGGTTCTGCAGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACACTCATGCATTATCTTTGCAAGGTCCTCGCTTCAAAGACACCAGCTCTTCTTAATTTTCATTTGGACCTCGGTAGCCTAGAGGCAGCAACCAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAGGCAGGAGCTTGTTGCTTCTGAAGGTGATGGTCCAGTCTCTGAAATTTTTCGCAAGACGCTGAAAGAATTTATTGCTATCGCTGAGACAGAGGTGGCATCAGTGACAAATCTATACTCTACTGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCAGCTCGTTGTCCATTTGAGCAGGTTACAGTGACATTATTGAACTTTATGAGATTATTTCGGAAAGCCCACGAAGAAAACTGCAAACAGGCCGAACTGGAAAGGAAAAAGGCGGAGAAAGAAGCTGAAATGGAGAAAGCCAAAGGAATTAGCCTTACGAAGAAGAGTGTGAAATAG 4566 46.47 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQGHFPDASFMVFNFREGDRRSQISDVLTQYDMTVMDYPRQYEGCPLLSLEMVHHFLRSSESWLSVEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSHLRYLQYISRRNLGSDWPPSDTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSTPANRTSRLLFSTSIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHLDEDLVHEEMMFRVMFHTAFVRSNIMMLNRDEVDVLWDARDQFPKDFRVEALFLDADAVVPSLTTALDDEDGNETGAASPEEFFEVEEIFSNTMDGQEAKGSNDPQVVKHVNRNEDLKEDLDPHAFQDCASDDGNHLRHDKKSDFDAVKDITVDDVRYKLDENIYPDLNVVKDIGVDDGDMNSNSFMVAANVLTHVEAQGLVDDAYEKFEDIEEKDDGRYTTTEKLENKALQKKLSADGSESEKLQIPISKKQPISSAKPTTDMGLTEQKVEQQEAQGFSGKQARPNIVSRWIPPNKGSYMNSVHVSYPPSRYNSAPAATLSSLVATDVNNDVDSIRPSYSALGELVLGPSSPVESIEETYSSSETLKPSHCDPQLEVPPPPLPTKPPSPYFPSPPRANAIPPPPPPPPPPPTSFHHIESTYSPPPLSVSSAPPPLVSSSKTVITPSPPPPPPFSRQNSVFSHSSTQPSWEQIYSSVSNAMVAGSIPPPPPPPPPPPLSSLSLVRPYTSKNIASTPPAPVLSPPPPSVMHETLASPPPPSSPASYGDKASPTLASPAPSPITSVHGASPPPPPTPPLITSVHGPPPPSMHGAFPPLPPPPPPPPPIHGTPSPSPPPPPPPPPMHGAPPPPPLPPPMHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPMHGAPPPPPPPPPPMHGAPPPPPPPPPMYGAPPPPPPPPMYGAPPPPPPPPMHGAPPPPPPPPGGGRAPPPPPPPPAPPPPPPPGGGRAPPPPPPPGGGGAPAPPPPPGGRGAPPPPRPPGGGGPPPPPPLGARGANAPPDPRGLSSGRGRGLSRSTATAPRRSSLKPLHWSKVTRVLQGSLWEELQRYGEPQIAPEFDVSELESLFSANVPKPADGGKSGGRRKSVGSKSDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKDNLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQISEFKKSLNTVNSACVEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVRQELVASEGDGPVSEIFRKTLKEFIAIAETEVASVTNLYSTVGRNADALALYFGEDPARCPFEQVTVTLLNFMRLFRKAHEENCKQAELERKKAEKEAEMEKAKGISLTKKSVK 1521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 985213 1000189 - CmoCh10G002270.1 Cmo10g00227 389573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 1162 1183 - -
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 846 920 - -
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 785 799 - -
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 638 653 - -
Cmo10g00227 1521 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cmo10g00227 1521 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1068 1503 - -
Cmo10g00227 1521 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Cmo10g00227 1521 Coils Coil 1484 1513 - -
Cmo10g00227 1521 SMART PTEN_C2_2 198 338 IPR014020 -
Cmo10g00227 1521 Coils Coil 1390 1410 - -
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 767 784 - -
Cmo10g00227 1521 Gene3D Formin, FH2 domain 1107 1495 IPR042201 -
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 951 1089 - -
Cmo10g00227 1521 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Cmo10g00227 1521 SMART it6_source 658 1519 IPR015425 -
Cmo10g00227 1521 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1109 1509 IPR015425 -
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 657 698 - -
Cmo10g00227 1521 Pfam Formin Homology 2 Domain 1114 1483 IPR015425 -
Cmo10g00227 1521 PANTHER FORMIN-J 1 1514 - -
Cmo10g00227 1521 Gene3D - 205 336 - -
Cmo10g00227 1521 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Cmo10g00227 1521 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 630 1119 - -
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 800 827 - -
Cmo10g00227 1521 MobiDBLite consensus disorder prediction 740 765 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00227 Cmo11g00187 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00417 Cmo-Chr9:1825147 Cmo10g00227 Cmo-Chr10:985213 1.66E-176 dispersed
Cmo10g00227 Cmo-Chr10:985213 Cmo13g01141 Cmo-Chr13:9242670 0 dispersed
Cmo11g00188 Cmo-Chr11:920830 Cmo10g00227 Cmo-Chr10:985213 2.52E-10 transposed
Cmo11g00189 Cmo-Chr11:923749 Cmo10g00227 Cmo-Chr10:985213 1.65E-36 transposed
Cmo01g00847 Cmo-Chr1:4495760 Cmo10g00227 Cmo-Chr10:985213 0 wgd
Cmo10g00227 Cmo-Chr10:985213 Cmo11g00187 Cmo-Chr11:912910 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00227 - - cmos:111429670 1568.52