Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00273 ATGGATGCTCGCCGAGGCTCCCGCATCGTCAACCCCAAAGTTCGTCAGGTCGGATTCTTCACCCTCGACGCTCCTAATTCCCCTGACCGTTCCCTCTCCGGTCCGGCCAACTGTGTCCCTTCTCAACAATCCCTCTCTCCTCCTACCAATTCCTTGTCTCCGGTTATGATCCCCCCTCCCCGTCATCTCTCCGATAACCTTGCCTCTCGCTCTGCTGTTCTTCCTGTTCCGGCTCCTGCCAATTGGAGGAATTCCGCTGATCAGATTCCTGTTGGCAGCTATAACCCTTCCGAGACGCTGCTTGCGACGTCCCCTATGGCGTCGCCTTCCAGTAGAATTGAGGACGAAGAGCTGGAGATGTCGGAGGATTCTTCCACCTCCGTTTGGTATCGCCGGAGTGGTTCCGGGAAGATTGCCTCGAGCTTTCCTGGCGTTGGAATCCACATGGCGGCCAAGTCGTCCGAGAACTCGCAGGCGCTGCCTCTTAAGACGTTGGAACCTAATAAGCCTGCTGGAGTTTCAGAAAAGAACGGAGGGGCATCCACGGAGGTACAGAATCGACAACCACCATCAAATTCGAAACCCCTGAAGGCAAAAACAACAAAGGCTGAAAGACGAGCTCTACAGGAGGCACAACGAGCTGCTAAAGGTGAGGCGAATAAGTCAGGTAATGCTCCTGGTAAAGCTGTGAAGCAGTCATTGGCTATGAAAGATAACAATGCTACGCCTTCGGCTGCACCTACTGACAAAAGAGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGAATGCAGTTTGATGATAAAAATAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTCGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAGCTTCCTGATCTCGTGTCAAAGTTTTTCCAACTTGACCCTATTCATCCTGCCATTTACAAGAATGCAAAACCTTTACATGATTCTTACTTTTCCCAATTCAAAAGAAGAACTCATAGCTTTGCCTTTTTTATTAGGACTGTTATGTTTTCTGATCCAATATTGATGACTATTGACTGTAATTTTATTTTTATGGACCTCATGCATCCACAACATGGTGATTTGCACGAATGGCTTCTTTATATGCCAACATTTTTTCACATATTGATACTTTATCAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGCTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAGGTTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGTAGGCCACTATCTGTTAGCATGGGAAATGCTATTAGGTTTTTGAAAAACCGCATTGCCAAATTACCATTGAATCTTCCGGAATCTGAAGTAAAAGCTACGCTTTGCTCAGATATCGATCGCTTTATCAATGAAAAGATTATAATAGCGGATGAGGTCATAGTTAGACATGCTGCTACTAAAATAAGGGATGGAGATGTTCTTCTTACATATGGATCATCGTCTGTTGTAGAGATGCTTCTATTACATGCCCATGAACTCGGAAAAGAATTCCGTATTGTGGTGGTGGATTCCCGTCCAAAACAAGAAGGGCGAGCATTGCTTCGTAGGCTCATAGAGAGGGGCCTAAATTGTACATACACTCATATCAATGCTATGTCTTATGTGATGCATGAAGTGACGCGAGTTTTTCTCGGGGCTGCTGCAGTATTATCTAACGGAACTGTATATTCAAGAGTGGGAACTGCAGCTGTTGCCATGGTTGCTAATGCATTCCGTGTTCCAGTCTTAATCTGCTGCGAAGCGTATAAATTTCATGAAAGAGTACAGCTTGATTCAATATGTTTCAATGAATTAGGTATATATTATCATGTTATCTTCTCCCGTATTTCCTTCCAGAAGAGGGAAAATGGACAATGTCTGAGCATTTTCAAATTTTGCGCAGGTGATCCAGAGGCTATCTCAAAGGTTCCCGAAAGGAAGGATATAAATTATCTAGATAATATGACTGCTAAAGAACAATTGCAACTTCTAAATTTAATGTATGACGCTACTCCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGGTAAGTTTGGTTCAATCGATATACCTCTCTCTGTCTCAGGCACTTGTTCAGATACGTTCCTTAATTCCTGCTTGTTATACTTGGGATGGTTCCTCTATAATCTTTTCTTCCCTTTCTTTAGAGGTAAAAAATTTGAAAACCAAAAATAGTAGTTTTCAGCGTCCTTTTAAGCTCCATTTGAAAACCATGATTAAGGAACGGTGA 2394 43.57 MDARRGSRIVNPKVRQVGFFTLDAPNSPDRSLSGPANCVPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVLPVPAPANWRNSADQIPVGSYNPSETLLATSPMASPSSRIEDEELEMSEDSSTSVWYRRSGSGKIASSFPGVGIHMAAKSSENSQALPLKTLEPNKPAGVSEKNGGASTEVQNRQPPSNSKPLKAKTTKAERRALQEAQRAAKGEANKSGNAPGKAVKQSLAMKDNNATPSAAPTDKRGGDRTLDKERKKDAPPPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDPIHPAIYKNAKPLHDSYFSQFKRRTHSFAFFIRTVMFSDPILMTIDCNFIFMDLMHPQHGDLHEWLLYMPTFFHILILYQVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKVLGRDLTAKIGGYVSFFNECRPLSVSMGNAIRFLKNRIAKLPLNLPESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSSVVEMLLLHAHELGKEFRIVVVDSRPKQEGRALLRRLIERGLNCTYTHINAMSYVMHEVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANAFRVPVLICCEAYKFHERVQLDSICFNELGIYYHVIFSRISFQKRENGQCLSIFKFCAGDPEAISKVPERKDINYLDNMTAKEQLQLLNLMYDATPSDYISMIVTDYGMVSLVQSIYLSLSQALVQIRSLIPACYTWDGSSIIFSSLSLEVKNLKTKNSSFQRPFKLHLKTMIKER 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1221877 1226387 - CmoCh10G002730.1 Cmo10g00273 389619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00273 797 Gene3D - 507 740 IPR042529 -
Cmo10g00273 797 MobiDBLite consensus disorder prediction 153 278 - -
Cmo10g00273 797 MobiDBLite consensus disorder prediction 198 212 - -
Cmo10g00273 797 MobiDBLite consensus disorder prediction 251 278 - -
Cmo10g00273 797 MobiDBLite consensus disorder prediction 21 63 - -
Cmo10g00273 797 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 330 - -
Cmo10g00273 797 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 400 651 - -
Cmo10g00273 797 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 667 732 - -
Cmo10g00273 797 Pfam Initiation factor 2 subunit family 413 731 IPR000649 GO:0044237
Cmo10g00273 797 SUPERFAMILY NagB/RpiA/CoA transferase-like 411 732 IPR037171 -
Cmo10g00273 797 MobiDBLite consensus disorder prediction 26 51 - -
Cmo10g00273 797 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 330 - -
Cmo10g00273 797 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 667 732 - -
Cmo10g00273 797 MobiDBLite consensus disorder prediction 86 110 - -
Cmo10g00273 797 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 400 651 - -
Cmo10g00273 797 MobiDBLite consensus disorder prediction 178 197 - -
Cmo10g00273 797 MobiDBLite consensus disorder prediction 79 128 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00273 Cmo11g00252 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00273 Cmo-Chr10:1221877 Cmo11g00254 Cmo-Chr11:1247375 0 dispersed
Cmo10g00273 Cmo-Chr10:1221877 Cmo11g00251 Cmo-Chr11:1239904 4.50E-150 wgd
Cmo10g00273 Cmo-Chr10:1221877 Cmo11g00251 Cmo-Chr11:1239904 4.50E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00273 K03680 - mnt:21405105 764.222