Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00306 ATGGAAGTCAATACCCACAGTAATATGTTACACAAAATTCTCTGTCAACAGCAAAAAATTGCAGTTTTAGCACTTCTGATCTTTACAGCTTTCTATTCAGCTGGGGCTTACGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATATAGTATCTTGGGCGGCAGATGGATATGTTGCTGCAGTGACAATGAACAACTTTCAGATGTACCGCCATATTAATGCACCAGGATGGACTCTAGGCTGGTCGTGGGCCAAGAAAGAAGTAATATGGTCGATGGTGGGAGCTCAGACAACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAATGTGCCTCACTGCTGCAAGAAAACCCCAGTAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAGCAATTCTCCAATTGCTGCAAGGGTGGAGTATTGGCATCTTGGGGACAGGATCCAGTAGGTTCGGTCTCCGCCTTTCAGGTGAGTGTTGGGCTAGCCGGCACTTCAAACAAAACTGTGAAATTGCCAAAGAACTTCACCCTGCTCGGTCCAGGACCAGGCTACACATGTGGACCTGCAAAGGTTGTGCCTTCTACAGTCTTCCTCACTCCTGATCGCCGCCGGAAAACTCAAGCACTGATGACATGGAATGTAACCTGCACTTACTCACAATTTCTGGCCTCTAAGAACCCAACTTGCTGCGTATCACTTTCAACTTTCTACAATGAGACGATCACCTCTTGCCCAACCTGCGCCTGTGGCTGCCAACACAAACATAATTGTATAAAGAGTGACTCAAAGCTATTGCACAAGGAAGGAATAAACACTCCTAAAAAGGATAACACACCTTTACTACAATGCACTCATCACATGTGTCCTATTCGAGTACACTGGCACGTAAAGATTAATTACAAGGATTACTGGCGTGTGAAGGTTGCTGTCACTAACTTCAACTATAGGATGAACTATACACTGTGGACACTGGCAGTGCAGCATCCAAATCTGAACAATGTAACTCAAGTCTTTAGTTTTGACTACAAGCCCCTTGTTCCCTATGAATCCATCAACGATACCGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTACAATCTGAAGTACTATTGAAGAAGGATAAGGATACCTTTACCTTCAAGCAGGGTTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCGTACCCGTTTCTACCCAACTCTGCGCCTGGAGGCTCGAGTGCAGTAGCCAAATTCACCGCCACTTTGCTTTTGATACTCTGGTTTTTGTTGTAA 1350 44.37 MEVNTHSNMLHKILCQQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWAADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTFYNETITSCPTCACGCQHKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCPIRVHWHVKINYKDYWRVKVAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLLKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSAPGGSSAVAKFTATLLLILWFLL 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1366269 1369598 + CmoCh10G003060.1 Cmo10g00306 389652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00306 449 PANTHER COBRA-LIKE PROTEIN 20 446 - -
Cmo10g00306 449 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Cmo10g00306 449 PIRSF COBRA 7 449 IPR006918 GO:0010215|GO:0031225
Cmo10g00306 449 PANTHER PROTEIN COBRA 20 446 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00306 Cmo11g00223 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00306 Cmo-Chr10:1366269 Cmo11g00223 Cmo-Chr11:1109123 0 dispersed
Cmo10g00306 Cmo-Chr10:1366269 Cmo10g00308 Cmo-Chr10:1369816 0 proximal
Cmo01g00448 Cmo-Chr1:2161265 Cmo10g00306 Cmo-Chr10:1366269 0 wgd
Cmo10g00306 Cmo-Chr10:1366269 Cmo11g00221 Cmo-Chr11:1105614 0 wgd
Cmo10g00306 Cmo-Chr10:1366269 Cmo13g01107 Cmo-Chr13:9067595 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00306 - - cmo:103494059 892.878