Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00308 ATGAAGGCTCGGCGTTTCGCTTCCACTGGATCCGTCGCCGGACTTACTGGCTTTGCCGTTTTGCTTCTCTTTCTACTTTCCAGCTTCAGTTTCACTGCAACAGAAGCCTATGATGCACTTGATCCAAACGGGAACATCACAATCAAGTGGGATGTCATGAGCTGGACTCCAGATGGCTATGTCGCTGTTGTTACAATGTACAACTTCCAGCAATACCGCCATATTGCAGCTCCAGGTTGGACATTGGGGTGGACATGGGCAAAGAAAGAAGTAATTTGGAGCATGATGGGAGCCCAAACAACAGAACAGGGCGACTGTTCAAAATTCAAAGGAAATATTCCTCATTGCTGCAAGAAAGATCCAACCGTTGTGGATTTATTGCCAGGAACACCTTACAATCAGCAGATTGCAAATTGTTGCAAAGGTGGAGTGATAAACTCATGGGCCCAAGACCCAGCCAATGCAGCAAGTTCATTTCAAGTCAGTGTTGGTGGTGCAGGAACAAGTAACAAAACTGTCAAACTCCCCAAAAACTTCACCCTTAAAGCCCCAGGACCTGGATACACTTGTGGGCCAGCAAAGATTGTGAAGCCAACCAGATTTGTATCTGGAGATAAAAGAAGAATAACTCAAGCTTTGATGACGTGGAATATTACATGCACCTATTCTCAGTTCCTCGCTCAGAAGACACCCACTTGTTGTGTTTCCCTCTCTTCCTTCTACAATGATACTATAGTCAACTGCCCAACCTGCACTTGCGGATGTCAAAACAACACGGCAGGTTCTGGGAGCTGTGTGGATCCGGACTCTCCATATTTAGCTTCAGTAGTATCAACTCCTGATAAATCAGGCAGCAATGCGCCCTTGGTTCAGTGTACCAGCCACATGTGCCCGATTCGAGTCCATTGGCACGTGAAGCTGAATTATAAGGATTACTGGAGGGTGAAGATCACAATCACCAATTTCAATTACAGAATGAACTACACACTCTGGAATCTCGTGGTGCAGCATCCCAATTTTGATAACATTACTAAATTATTCAGCTTTAACTACAAGTCGTTGAGCCCATATGGTGACCTAAATGATACTGCGATGTTGTGGGGAGTTAAATTCTACAATGATCTGCTCAATCAAGCTGGCCCTCTTGGTAATGTGCAATCTGAGCTCCTATTTCAGAAAGACCAGAACACTTTCACTTTCGACAAGGGTTGGGCTTTTCCAAGAAGAGTTTATTTCAATGGTGATAACTGTGTGCTGCCACCTCCAGATGCCTATCCTTATTTGCCAAATGCCAGTTCCAGACCAGCTATATCTCTACTTATGACCATCTTAATATCTTTGACATTACTGTTGAATTTTGCACAATAA 1368 44.23 MKARRFASTGSVAGLTGFAVLLLFLLSSFSFTATEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMYNFQQYRHIAAPGWTLGWTWAKKEVIWSMMGAQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWAQDPANAASSFQVSVGGAGTSNKTVKLPKNFTLKAPGPGYTCGPAKIVKPTRFVSGDKRRITQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNTAGSGSCVDPDSPYLASVVSTPDKSGSNAPLVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTLWNLVVQHPNFDNITKLFSFNYKSLSPYGDLNDTAMLWGVKFYNDLLNQAGPLGNVQSELLFQKDQNTFTFDKGWAFPRRVYFNGDNCVLPPPDAYPYLPNASSRPAISLLMTILISLTLLLNFAQ 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1369816 1373130 - CmoCh10G003080.1 Cmo10g00308 389654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00308 455 PIRSF COBRA 10 455 IPR006918 GO:0010215|GO:0031225
Cmo10g00308 455 PANTHER PROTEIN COBRA 10 451 IPR006918 GO:0010215|GO:0031225
Cmo10g00308 455 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Cmo10g00308 455 PANTHER COBRA-LIKE PROTEIN 10 451 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00308 Cmo13g01107 CCT
Cmo10g00308 Cmo13g01107 ECH
Cmo10g00308 Cmo11g00221 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00308 Cmo-Chr10:1369816 Cmo11g00221 Cmo-Chr11:1105614 0 dispersed
Cmo10g00306 Cmo-Chr10:1366269 Cmo10g00308 Cmo-Chr10:1369816 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00308 - - csv:101213424 906.36