Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00314 ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTGCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATCGACTGGCTCCCCGACGTCACCAAGCTCGATATCGACAAGCTCCCGCCGTTGCAAATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCGCTCCCTCCGCCCTTCGCCGTCGACATGAAAGGCGATTCTATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACCAAAGGGAAGTGGATTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCTTCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGACGGTAATGGCACCGACCGCTCCAATAAAGATGGGACGGCTGGTGACTCATAG 939 43.02 MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1404121 1405059 - CmoCh10G003140.1 Cmo10g00314 389660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00314 312 ProSiteProfiles TCP domain profile. 47 105 IPR017887 -
Cmo10g00314 312 PANTHER TRANSCRIPTION FACTOR TCP5 18 312 - -
Cmo10g00314 312 Pfam TCP family transcription factor 47 165 IPR017887 -
Cmo10g00314 312 MobiDBLite consensus disorder prediction 1 21 - -
Cmo10g00314 312 MobiDBLite consensus disorder prediction 1 29 - -
Cmo10g00314 312 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 312 IPR005333 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00314 Cmo13g01114 CCT
Cmo10g00314 Cmo11g00214 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00314 Cmo-Chr10:1404121 Cmo14g01189 Cmo-Chr14:10009759 5.85E-43 dispersed
Cmo01g00439 Cmo-Chr1:2133762 Cmo10g00314 Cmo-Chr10:1404121 1.71E-38 wgd
Cmo10g00314 Cmo-Chr10:1404121 Cmo11g00214 Cmo-Chr11:1068115 6.86E-133 wgd
Cmo10g00314 Cmo-Chr10:1404121 Cmo13g01114 Cmo-Chr13:9110094 2.04E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10446 PF03634 TCP 7.90E-23 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00314 - - csv:101218680 408.297