Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00341 ATGGCATGGCATGGCTTGGATTGGCTTGGCTTGGCTTGGCTTGGCTTGCACATTCTTGTCATTTCATTAGATTCTGGTTTTGTTGTGGGGGTTACACATCCATATAAGAAGTCTCTGGCTTCCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCTGAGTATATTGGAGGCAGCAATGGTTGAGCTCGATCCATCAAAGAAAGTGGCCGATAGATATTTAAAGCGTGAGGTTCTCGGGGAGGGTACCTATGGTGTTGTATATAAGGCTATTGATACTCAGACAGGTCAGACGGTTGCAATCAAGAAAATTCGGCTTGGGAAACAAAAAGAGGGAGTAAATTTTACGGCTCTTCGAGAAATCAAGCTGCTTAAAGAGCTCAAAGATCCAAATATAATTGAGTTAATTGATGCATTCCCTCACAAAGGAAATTTGCATCTCGTATTTGAGTTTATGGAGACAGACCTTGAAGCTGTTATACGTGATCGAAACATATTTCTTTCCCCAGCTGACATAAAATCATTCCTTCAGATGACGTTGAAAGGACTTGCTTATTGCCACAAGAAATGGGTTTTACATAGGGATATGAAGCCAAATAATTTGTTGATAGGATCAAATGGTCAACTGAAACTTGCAGATTTTGGTTTGGCTCGGATATTTGGGAGTCCGGATCGTAGATTTACTCACCAGGTGTTTGCTCGATGGTACAGAGCGCCTGAGCTATTGTTTGGCACTAAGCAATATGGCTCTGCAGTTGATGTTTGGGCAGCAGCTTGTATTTTTGCTGAACTATTACTTCGTCGACCTTTTCTTCAGGGTTCAAGTGACATTGACCAATTGGGGAAGATCTTTGCAGCTTTTGGAACACCAACGCCTTCTCAATGGCCTGATATGTTATACCTACCTGATTACGTGGAGTTCCAATATGTTCCTGCCCCTCCCCTACGATCATTGTTTCCTATGGCTAGCGATGACACGCTGGATCTCCTATCAAAGATGTTTGCATATGATCCAAAATCTAGAATTACCATTCAACAAGCATTGGAGCATAGATACTTCTCATCTGCACCACTTCCCACAGATCCTAGTAAGCTTCCAAGGCCTACTTCAAAGCAAGAACCTACGAACTCTCGAGGTTTGGACTTAAATTCAAATGAGGCTCCTAACTCTCCTCCAAGAAAGTCGAGAAGAGTAATGTCAGATCGTGAGGCTTTTGAAGGAAATGCATATAAATCTGATAGGCTTGATGACCATGTTAGTGAGCGAGAGGCAGCTGCTGGAAATACAAGCAAGAATGAAGCAGTGCCTATGTCGTTGGATTTTTCTGTTTTTGGTGGAAAACCTCCAAATAGACCTACAATTAACAGTGCTGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAACAATAA 1416 41.95 MAWHGLDWLGLAWLGLHILVISLDSGFVVGVTHPYKKSLASFLPSFLPSFLLSILEAAMVELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSFLQMTLKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDMLYLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFSSAPLPTDPSKLPRPTSKQEPTNSRGLDLNSNEAPNSPPRKSRRVMSDREAFEGNAYKSDRLDDHVSEREAAAGNTSKNEAVPMSLDFSVFGGKPPNRPTINSADRSHLKRKLDLEFQQ 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1537400 1543490 - CmoCh10G003410.1 Cmo10g00341 389687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00341 471 PANTHER CELL DIVISION PROTEIN KINASE 67 416 - -
Cmo10g00341 471 SUPERFAMILY Protein kinase-like (PK-like) 68 359 IPR011009 -
Cmo10g00341 471 ProSitePatterns Protein kinases ATP-binding region signature. 78 102 IPR017441 GO:0005524
Cmo10g00341 471 Gene3D Phosphorylase Kinase; domain 1 63 152 - -
Cmo10g00341 471 MobiDBLite consensus disorder prediction 394 423 - -
Cmo10g00341 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Cmo10g00341 471 CDD STKc_CDK7 71 365 IPR037770 GO:0005675|GO:0008353|GO:0070985
Cmo10g00341 471 Pfam Protein kinase domain 74 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00341 471 Gene3D Transferase(Phosphotransferase) domain 1 153 368 - -
Cmo10g00341 471 PANTHER CYCLIN-DEPENDENT KINASE D-2 67 416 - -
Cmo10g00341 471 SMART serkin_6 72 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00341 471 MobiDBLite consensus disorder prediction 354 460 - -
Cmo10g00341 471 MobiDBLite consensus disorder prediction 364 390 - -
Cmo10g00341 471 ProSiteProfiles Protein kinase domain profile. 72 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00341 Cmo11g00303 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00341 Cmo-Chr10:1537400 Cmo18g00940 Cmo-Chr18:10556806 2.89E-91 dispersed
Cmo15g01441 Cmo-Chr15:9780508 Cmo10g00341 Cmo-Chr10:1537400 2.09E-20 transposed
Cmo10g00341 Cmo-Chr10:1537400 Cmo11g00303 Cmo-Chr11:1460967 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74601 PF00069 Pkinase 1.80E-72 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00341 K02202 - csv:101217645 791.571