Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00348 ATGTCTTCACTCCCACGAATCTTTCTTCTCTTCTCTCTTTGTTTCTCTCTCTTTCCTTCTTTCTTCTCTCTCTCCCATCCAGACCCACTAACAATCCGCCCATTTCAGGTGAACCACTCGTCGCCGGCGACTATTCCGGCATTCCCAGAACAGTCCGACGTTCAGGGCTGCCGCCTGGACCTCCCCGACGACCTCTTCCATGGGATTAAGACAGCTTGCGGTCCTTCAAAAGGGGGTGTCTCCGGGAATCTCCACCGCAGCCGGTGCTGCCCCGTCTTGGCCGCTTGGCTCTACGCTGCTTACTCTGCCACCGCATTGCGGAGACCCGTTCGAGTCAGCGCCGCTCCAGGCCACACAGCGCCGTCGTATGACCTGCCCCTGCTCCCCGATGACTCCGAAACTTGCGTCAGTAACTTGGATCAGGCTTTGAATCAAAAGGGTATTGAGCTAATGAAGCCTAATGAAACTTGTGATGTGGTTTATTGCTATTGTGGGATCAGATTGCATCCTCTGAGCTGCCCTGAGGCGTTTTCACTGACCCATGATGGTATTCTTGAAGGAGATGGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTAGCAATGCCAATGGATTTCCAGGCCTTGGTGGCTGCTCCAAATGCTTGAGTACTCTTTATCAGCTCAACAACAAGGAAGCTTTGAATTCAAGCAAGCCAGAGAACAGGACCATCAAAATGCACCACAAGGAGTGTCAGCTGATGGGTCTAACATGGCTGCTTGCCAAGAACCGAACGGCATATATCCACACCGTTACATCGGTGCTTCGGGCTAAAATGATGAGCAAAGACGGGTCGGATCCCCGGTCGTGTACTCTCAACAGCGACGGGATGCCTCTGGCTGTCAACTCGACTGAGATCTCCGGCAGCTCTGTTTCAGTCCCCATTCAGGCACCATTGAAGCTTGGCCTGGTTTGGCTTGCTTTGATGTTCAATCTGTTCATGTTGGGCTCTACACAATGA 1005 51.94 MSSLPRIFLLFSLCFSLFPSFFSLSHPDPLTIRPFQVNHSSPATIPAFPEQSDVQGCRLDLPDDLFHGIKTACGPSKGGVSGNLHRSRCCPVLAAWLYAAYSATALRRPVRVSAAPGHTAPSYDLPLLPDDSETCVSNLDQALNQKGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLTHDGILEGDGNVKRLERNCLSSSNANGFPGLGGCSKCLSTLYQLNNKEALNSSKPENRTIKMHHKECQLMGLTWLLAKNRTAYIHTVTSVLRAKMMSKDGSDPRSCTLNSDGMPLAVNSTEISGSSVSVPIQAPLKLGLVWLALMFNLFMLGSTQ 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1576542 1578648 - CmoCh10G003480.1 Cmo10g00348 389694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00348 334 Pfam SPARK 55 246 IPR043891 -
Cmo10g00348 334 PANTHER GPI-ANCHORED PROTEIN 9 328 IPR040376 -
Cmo10g00348 334 PANTHER PROTEIN, PUTATIVE-RELATED 9 328 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00348 Cmo11g00307 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00132 Cmo-Chr2:669214 Cmo10g00348 Cmo-Chr10:1576542 1.92E-66 dispersed
Cmo10g00348 Cmo-Chr10:1576542 Cmo11g01926 Cmo-Chr11:13352087 3.57E-71 dispersed
Cmo10g00348 Cmo-Chr10:1576542 Cmo11g00307 Cmo-Chr11:1487679 2.39E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00348 - - csv:105434582 571.237