Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00371 ATGGCCTGCCCATCTCTGCCGCCGGCCACCATCACCTCCGTCATTCTCATTGTGATCTCATTGGAGCTGATTGTGTGTTGGGGCGCTCACACGGATGCAGAAGCGCTCCTCAAGTTCAAAAGCTCTCTTGAAATAAGCAATGATGCGTTACGTGATTGGGGCCCGGAGTCCTCCCCTTGCTCCGAGAACAAGGCGAATTGGGTGGGTATTATTTGCCACAAGGGCCATGTTTGGGGCTTGAAGCTCGAGCACATGGGGCTGAAGGGCAGCATTGACATGGAGTCCCTCGAAGGGATCCCCTTTTTAAGGATTATTAGCCTTAAGAACAATAATTTTGAGGGCTCTTTGCCGGATGTCAAGAGAGTTGGGGCATTGAAATCTCTGTTTTTGTCTGGAAACCAATTCTCAGGCAGCATTCCTGGGGATTCGTTTTCCAACATGATGTCTTTGAAGAAGGTTCATTTGGCACACAACCAGTTTGAGGGTCCGATTCCTTGGTCCTTGGTCGAGTTGCCTCGCTTATTGGAGTTGAGGCTGGAAGGAAACAAGTTTTCTGCCCGAATTCCTAATTTCCAGCAGAAGGCATTCAAGTCCTTTAATATCTCCCATAACGATCAACTTCATGGCCCAATCCCACAAGCCCTCTCCCGCATGGATCCATCCTCCTTTTCAGGCATTGAAGGCTTATGTGGACCGCCACTTAATAAACCATGCAATACCGCAGATATGCCATCAATCGCGAGCATCATCATGGTTTCAATAGCTCTGACACAAGCTTTGCTTGCCATCGGTGCAGGAATAGTAATCCTTAGCCGTCGGAACCAATCATCTTCTTGTGAAGAGGTTCCAGCCAACGGCAAATCTCCAGGTGCTAGAGCGTTAGATCCAGGAGTCGGGGCAAAGTCACCGGACCGTGCCTCCAGTCATGGATCGGGGAGACGGGTGGCTGAGGGTGCTAAGTTATCATTTGTAAGAGAGGACTTGGAGAAATTTGATTTATCAGACTTGCTTAAAGCCTCTGCACAGATCCTAGGAAGTGGGTGCTTCGGTTCTTCTTACAAGGCAGCCATGACCGGCGGACCTGTGGTGGTTGTAAAGAGGTTTAAGCAAATGAACAATGTGGATAAAGATGAATTCCAAGAACATATGAAGAGAATTGGAAGATTGAAACACCCCAACTTGCTTCCTCTCGTAGCCTACTTCTACAAAAAGGAAGAAAAGCTTCTCATAACAAACTTTGTTGAGAAGGGTAGCTTGGTTATTCAACTTCATGGGCAAAAAGCCGAGGGTCAACCAGCCCTTGATTGGTCTGCAAGGTTGAAGATCATCAAGGGCATTGCAAAGGGTCTTCGCTATCTCTACAGTGAGCTTCCAAGTCTCATAACCCCACACGGCCATCTCAAGTCCTCAAATGTGCTTCTCAATGCCAACTATGAGCCCCTTCTTTCGGACTATGGCCTGATCCCAGTTATCAACCAAGAGCACGCCCAAGATCTAATGGTGGCCTACAGATCCCCGGAGTACAACCAACAAGGTCGCATCACAAAGAAAACAGATGTGTGGAGCTTTGGGCTGTTGATCCTAGAGATTCTAACAGGGAAACTCGTAGCCAACTTTCTGCATCAGGGCAAGGGTGGGGACGAGGAAGATTTGGCAAGTTGGGTCAAATCCATTCCTGCGACAGAATGGAATAGCCAAGTATTTGATAAGAACATGGGGCCAACCAAGAGCAGCGAGGGTGAGATGATGAAGCTTCTGAGGATTGCATTAGCATGTTGCGAGAGCGACTTTGAAAAGAGGCTGGATTTGAGAGAGGTTGTGGAGAAGATTGAGGAGTTGAAAGAAAAAGATGGGGATGAAGATTTTTATTCTTCATACGCCAGTGAATCTGATGTTAGATCTTCAAGAGGGTTATCTGATGAACTCAATTTTACCATCAGAAGGATTTGGGAATTGGATATGAACATGAAAGTAAGAATCAAGCACTTCTTGCCACGGACTTCCATACATGAATTGGTAGCTTCGCCAGAATCCTTAAATCCAAATCGAAAGTCCAGCCCTCGGTTCTGGTATCCTAACCATCGCTCGCCCTGCCTGCGCGGACACTGTATTTTGCAGTTGCAGCCGCCGCCGCAGCAGGGACGAGACTACATCGCTTCCAAAATTCTCGGACTTCTCATCGGCGCCCACGATACCGGCTTCTGTACCTGCACTTTCATCGTCAAATTCGATCCAACGAGGTTCGAAGGGAGCGGTCCGGCGCCGTACACGTACGTTCCGTTCGGCGGAGGGCCGAGAAAGTGCCCCGGCAAAGAGTACGCGAGGCTGGAGGTTCTTGTTTTCATGCACCATTTGGTCAAACGCTTCAAATTCCAACTTTCCATTCCCGACGAAAAAGTCGCCGCCAATCCAATTCCCTTCCCCGTCCACGGCCTTCCGGTTCGCCTATTCCCCCACGCGCCGCCTGATTCCCGCCCGTAA 2481 48.97 MACPSLPPATITSVILIVISLELIVCWGAHTDAEALLKFKSSLEISNDALRDWGPESSPCSENKANWVGIICHKGHVWGLKLEHMGLKGSIDMESLEGIPFLRIISLKNNNFEGSLPDVKRVGALKSLFLSGNQFSGSIPGDSFSNMMSLKKVHLAHNQFEGPIPWSLVELPRLLELRLEGNKFSARIPNFQQKAFKSFNISHNDQLHGPIPQALSRMDPSSFSGIEGLCGPPLNKPCNTADMPSIASIIMVSIALTQALLAIGAGIVILSRRNQSSSCEEVPANGKSPGARALDPGVGAKSPDRASSHGSGRRVAEGAKLSFVREDLEKFDLSDLLKASAQILGSGCFGSSYKAAMTGGPVVVVKRFKQMNNVDKDEFQEHMKRIGRLKHPNLLPLVAYFYKKEEKLLITNFVEKGSLVIQLHGQKAEGQPALDWSARLKIIKGIAKGLRYLYSELPSLITPHGHLKSSNVLLNANYEPLLSDYGLIPVINQEHAQDLMVAYRSPEYNQQGRITKKTDVWSFGLLILEILTGKLVANFLHQGKGGDEEDLASWVKSIPATEWNSQVFDKNMGPTKSSEGEMMKLLRIALACCESDFEKRLDLREVVEKIEELKEKDGDEDFYSSYASESDVRSSRGLSDELNFTIRRIWELDMNMKVRIKHFLPRTSIHELVASPESLNPNRKSSPRFWYPNHRSPCLRGHCILQLQPPPQQGRDYIASKILGLLIGAHDTGFCTCTFIVKFDPTRFEGSGPAPYTYVPFGGGPRKCPGKEYARLEVLVFMHHLVKRFKFQLSIPDEKVAANPIPFPVHGLPVRLFPHAPPDSRP 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1693944 1702089 - CmoCh10G003710.1 Cmo10g00371 389717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00371 826 SUPERFAMILY L domain-like 29 218 - -
Cmo10g00371 826 MobiDBLite consensus disorder prediction 279 313 - -
Cmo10g00371 826 SUPERFAMILY Protein kinase-like (PK-like) 342 612 IPR011009 -
Cmo10g00371 826 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 761 770 IPR017972 GO:0005506|GO:0016705
Cmo10g00371 826 PRINTS E-class P450 group I signature 768 791 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00371 826 PRINTS E-class P450 group I signature 758 768 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00371 826 PRINTS E-class P450 group I signature 346 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00371 826 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Cmo10g00371 826 Pfam Protein tyrosine and serine/threonine kinase 342 610 IPR001245 GO:0004672|GO:0006468
Cmo10g00371 826 SUPERFAMILY Cytochrome P450 702 818 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00371 826 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Cmo10g00371 826 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 10 624 - -
Cmo10g00371 826 Gene3D Phosphorylase Kinase; domain 1 305 413 - -
Cmo10g00371 826 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 624 - -
Cmo10g00371 826 Gene3D Transferase(Phosphotransferase) domain 1 414 632 - -
Cmo10g00371 826 ProSiteProfiles Protein kinase domain profile. 338 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00371 826 Gene3D Ribonuclease Inhibitor 29 239 IPR032675 -
Cmo10g00371 826 Gene3D Cytochrome P450 740 818 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00371 826 Pfam Cytochrome P450 742 794 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00371 Cmo-Chr10:1693944 Cmo14g01203 Cmo-Chr14:10250707 0 dispersed
Cmo10g00371 Cmo-Chr10:1693944 Cmo11g00333 Cmo-Chr11:1627955 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74604 PF07714 PK_Tyr_Ser-Thr 1.40E-30 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00371 - - csv:101213261 997.653